Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00396 ATGAATATATTCATCGGTGTCTTCATCCTCGTCATCTCCGTTTTCCTGCTACTTACCACGAGAAGTAAATCATCGAAAAGGCTCCCTCCTGGATGTCTCGGAATTCCAATCATAGGCCAAAGCATCAGCTTTCTCCATGCCTTGAGGACGAACACTGCAGAACAATGGCTGCACCAAAGGATCAAAAAGTATGGACCGGTCTCCAAGCTCAGTCTCTTCGGAAAACCAACTGTTTTCATAAGTGGACAGGCTGCAAATAAGCTAGTCTTCACCAGTGATGATAGAACCATCAGTAACCAACAAACCAAGTCCATTACGATGATTTTAGGTGACCGGAGTATAGTTGAGCTCAGCGGAGACGACCATAAACGCGTAAGAGGTGCAATTCTATCGTTCTTAAGACCGGATTCGTTGAAAAAATACGTCCGAATAATGGACGAAGAAGTCAGAGAGCACCTCAAGATCCACTGGCAAGGCCAGGAAGAAGTCTCTGCCTTGCCCTTGATGAAGACTCTCACATTCAACATGATTTGTTCGCTTCTGTTCGGGATTGAGAAAGGAATTGCGAGAGAAAAATATATGGCTTGTTTCCGGACGATGATAAGAGGAATATGGTCGGTTCCGATCGACTTGCCATTCAGTTCATTCAACAAAAGCTTGCGAGAAAGCAAAAGGGTCCAAGCCATGTTAAAGGATCTGATTGAAGAGAAGAAAATAAAACTCGAAAAAGAGGTCGATGCTCCTCATCAAGATCTCATCACTCACTTGCTCAGACTTCAAAAGGAAGGCAACAATGAAGAATTAAGTGAGAAGGAAATCGTCCATAATGCGATAGCCGTCATGATCGCGGGACACGATACGACATCTGTTCTACTTACTTTCATAATGAGGCTGCTGGCTAAAGATGAAGCTGTTTACGCAGCTGTTCTTCACGAACATGAAGAGATAGAAAAAAGCAAGCTCCCTGGAGAGTACCTAAGCTGGGAAGAACTTAACAAGATGAAGTACACATGGAGAGTTGCTCTCGAAATGTTGAGAGTAGTCCCTCCGGTTTTTGGCGGATTCCGACAGGCCTTGAAAGATATCGAATTCGATGGATATCTCATTCCGAAAGGATGGCAAATCTTCTGGGCGACGTCGATGACGCATATGGACGAGAGCATATTTCCAGAGCCGTCGAAGTTTGATCCGAGTAGATTCGAGAACCCATCTTCGGTCCCTCGATTTTGTTTTGCATCGTTCGGGGGTGGTCCGAGAATCTGTCCCGGGAATGAGTTTGCAAGGATAGAAACTCTTGTTGCCATCCATTACATCATTACACACTTCACCTGGAAGCTATCTGCTGATGATCTTTTCATAAGAGATCCCACTCCAACACCAACTAAAGGATTACCTATTCAAATTACACTGAGGAAACCATTATCAAATTGA 1431 44.23 MNIFIGVFILVISVFLLLTTRSKSSKRLPPGCLGIPIIGQSISFLHALRTNTAEQWLHQRIKKYGPVSKLSLFGKPTVFISGQAANKLVFTSDDRTISNQQTKSITMILGDRSIVELSGDDHKRVRGAILSFLRPDSLKKYVRIMDEEVREHLKIHWQGQEEVSALPLMKTLTFNMICSLLFGIEKGIAREKYMACFRTMIRGIWSVPIDLPFSSFNKSLRESKRVQAMLKDLIEEKKIKLEKEVDAPHQDLITHLLRLQKEGNNEELSEKEIVHNAIAVMIAGHDTTSVLLTFIMRLLAKDEAVYAAVLHEHEEIEKSKLPGEYLSWEELNKMKYTWRVALEMLRVVPPVFGGFRQALKDIEFDGYLIPKGWQIFWATSMTHMDESIFPEPSKFDPSRFENPSSVPRFCFASFGGGPRICPGNEFARIETLVAIHYIITHFTWKLSADDLFIRDPTPTPTKGLPIQITLRKPLSN 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5010874 5012537 - Bda030977.1 Bda09g00396 12646

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00396 476 Pfam Cytochrome P450 29 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PANTHER OS07G0520300 PROTEIN 14 470 - -
Bda09g00396 476 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PANTHER CYTOCHROME P450 26 14 470 - -
Bda09g00396 476 SUPERFAMILY Cytochrome P450 22 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Bda09g00396 476 Gene3D Cytochrome P450 18 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00396 476 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00396 - - - tcc:18593563 640.573
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda07g00357 Bda09g00396 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00356 Bda-Chr7:4572606 Bda09g00396 Bda-Chr9:5010874 3.47E-58 dispersed
Bda07g00357 Bda-Chr7:4578678 Bda09g00396 Bda-Chr9:5010874 0 dispersed
Bda09g00396 Bda-Chr9:5010874 Bda12g00999 Bda-Chr12:41348074 5.84E-120 dispersed
Bda09g00395 Bda-Chr9:5008364 Bda09g00396 Bda-Chr9:5010874 2.89E-162 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g494 . . Bda07g00357 Bda09g00396 . . . . . . . Cma09g00945 . Car09g00859 Sed10g2110 Cpe06g00761 . Bhi09g01887 Tan01g3346 Cmetu01g0289 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo09g00944 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda09g00396 Bda_Chr09 FPKM 5.631659 6.98804 18.556284 19.490168 11.700933 6.306849 14.096658 17.7579 19.449198