Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00402 ATGGTTGATCTAGAAGTTCAAATTCCAACTGCTTTCGATCCATTCGCTGAAGCCAAAGATACGGATGCTCCTGGAGCAAAAGAGTATGTTCATATCCGCGTTCAGCAAAGAAACGGTAAAAAGTGCCTGACCACAGTTCAGGGGCTGAAGAAAGAGTACAGCTACGAGAAGATTCTGAAAGATGTCAAAAAAGAGTTTTGCTGCAATGGAAATGTGGTGCAGGACAAAGAATTGGGGAAGATAATTCAACTCCAAGGTGATCAGCGCAAGAACGTTTCTCAGTTCCTTGTGCAGGCTGGTCTTGTGAAGAAGGATCATATCAAAATTCATGGTTTCTGA 339 42.77 MVDLEVQIPTAFDPFAEAKDTDAPGAKEYVHIRVQQRNGKKCLTTVQGLKKEYSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDHIKIHGF 112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5042126 5042464 - Bda030982.1 Bda09g00402 12652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00402 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Bda09g00402 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Bda09g00402 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Bda09g00402 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Bda09g00402 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Bda09g00402 112 Gene3D - 2 112 - -
Bda09g00402 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Bda09g00402 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - -
Bda09g00402 112 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 112 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00365 Bda09g00402 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00387 Bda-Chr9:4936926 Bda09g00402 Bda-Chr9:5042126 1.07E-58 dispersed
Bda09g00402 Bda-Chr9:5042126 Bda12g00894 Bda-Chr12:39679941 3.02E-54 dispersed
Bda07g00365 Bda-Chr7:4661914 Bda09g00402 Bda-Chr9:5042126 1.29E-78 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00402 K03113 - csv:101202908 214.542