Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00418 ATGTTTGCCATGGACGAGTCTTTTATCTCCTTCCCAATGATCTGCTCCTTCTTGCTTCTTCTGCTAATGGCGATGAGGAAAACCAGAAGAAACACCTCCTCTCCAAAACTGCCACCTGGCCCATGGAAATTTCCCATCGTCGGCGATATGCACCGCTTCATCGGCCACCATCCCCACACCCGCTTGAAACAATTGGCCGATAGATACGGTCCGGTGATGCATCTGCAACTCGGAGAAATCTCCACCGTCGTCGTTTCCTCCGCCGAAATGGCGAGAGAGGTCTTGAAAACCCACGACCTTAATTTTGCTAACCGACCTTCTACTCTCTTGAGCTCTTACTTAACGTATGGCCAAAAAGACATTGTCTTTGCTCCCTATGGAGATTACTGGAGAGAGATCCGAAAAATATGTACGCTTCAACTTCTGAGCACGAAAAGGGTTCAGTCATTTCGGCCAATCATGAACCAAGAAACAGCGAAAATGGTGGAAGAGCTTGAATCTAATAACGGGTCAGTGGTGAATTTGACTAAAATGATATCTTCCACTCTTAATACCATCACTTCCAACTCTGCGTTGGGAGGGAAGTGTAACGAGCAGGAAGAGTTTCTTGCTCTGTCGGAAAAGATTGTGTTTTTGCTGACTGGTTTTCGGTTGGTCGATGTTTTTCCTTCCCTTAAATTTCTTCATTACATTGGTGGATCTAAGAACAAAGCAGAAAAACTTCATAAAGAATGCGATCGAATCCTGGAAAACATCATAAATGCACATAAATCAGAATCAGACAAGGGGAAATCCAATGGAGATGTTCAAGAACCAGAGGATCTTGTCAATGTTCTTCTCAAAATTCAGGAGAAAGACGACCTTCCGTTTCCCATGGCAAACGAAAACGTAAAAGCAATTATCTTCGATGTTTTCGCTGCAGGATCAGAAACATCCGCCACACTGATCGAATGGGCGATCTCAGAGCTCGTAAAACACCCAGAAATAATGAAAAAAGCTCAAGCAGAAATCAGGCAAGTTTTCGATTCAAAAGGAGAAATAGACGAAACAGGTCTCCAACAACTAAAATACTTCCGACTGATCATAAAAGAAACGCTGAGACTACACCCTGCAGTCCCATTACTACTCCCGAGAGAAAGCAGGAGCAATGGCGAAATCAACAGCTACCACATTCCGGCGAAAACAAAAGTGATTGTCAACGCCTGGGCAATCGCAAGAGATCCAAAAATATGGACAGACCCAGAAAGTTTTTACCCAGAAAGATTTCTGGAAAGAGACGTAGACTTTAAAGGAGCAACCTTTGAGCTGATTCCGTTCGGAGCTGGAAGAAGAATCTGCCCAGGAATGGCGCTAGGGTTAGCAACTTCGGAGATAATTCTAGCGAACTTGCTCTATCATTTCAACTGGGTAATTCCAAACGGTGGAAAACCAGAGAAGCTTGATATGGCTGTCTCTTACGGACCAACGAGCAAAAGGCTGAACAGATTAAAACTGATTCCAGTTCGTTATAATCGTCCGATCAAGACAACACCTTGA 1536 44.08 MFAMDESFISFPMICSFLLLLLMAMRKTRRNTSSPKLPPGPWKFPIVGDMHRFIGHHPHTRLKQLADRYGPVMHLQLGEISTVVVSSAEMAREVLKTHDLNFANRPSTLLSSYLTYGQKDIVFAPYGDYWREIRKICTLQLLSTKRVQSFRPIMNQETAKMVEELESNNGSVVNLTKMISSTLNTITSNSALGGKCNEQEEFLALSEKIVFLLTGFRLVDVFPSLKFLHYIGGSKNKAEKLHKECDRILENIINAHKSESDKGKSNGDVQEPEDLVNVLLKIQEKDDLPFPMANENVKAIIFDVFAAGSETSATLIEWAISELVKHPEIMKKAQAEIRQVFDSKGEIDETGLQQLKYFRLIIKETLRLHPAVPLLLPRESRSNGEINSYHIPAKTKVIVNAWAIARDPKIWTDPESFYPERFLERDVDFKGATFELIPFGAGRRICPGMALGLATSEIILANLLYHFNWVIPNGGKPEKLDMAVSYGPTSKRLNRLKLIPVRYNRPIKTTP 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5239190 5240847 + Bda030998.1 Bda09g00418 12668

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00418 511 Pfam Cytochrome P450 38 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PANTHER CYTOCHROME P450 71B11-RELATED 13 503 - -
Bda09g00418 511 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Bda09g00418 511 PANTHER CYTOCHROME P450 71D10 13 503 - -
Bda09g00418 511 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda09g00418 511 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00418 - - K23806 zju:112488857 573.933
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00418 Bda-Chr9:5239190 Bda09g00428 Bda-Chr9:5496063 0 dispersed
Bda15g00619 Bda-Chr15:9362166 Bda09g00418 Bda-Chr9:5239190 7.68E-118 dispersed
Bda09g00418 Bda-Chr9:5239190 Bda09g00420 Bda-Chr9:5281400 1.09E-151 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g633 . . . Bda09g00418 . Bpe08g01101 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma07g01265 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000106 14 8 5 4 4 8 0 8 5 13 4 7 6 8 6 16 5 16 1 6 10 8 6 12 5 13 10 7 10 3 228
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda09g00418 Bda_Chr09 FPKM 11.408863 12.609068 6.469117 8.424109 9.418333 7.556015 8.567479 8.6997 8.264709