Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00436 ATGGCCTTCAATGGTTCAGAGCAACCCTTGTTGTCCGGATTATTAAATCCTAATTGCGAAAGAAAGACAATGAATGTAACTATGAGGAAGAGAAGATTTCGTCGCACCAGAAGTGCTCCCATTGTAGATTCTGGACCTTCACAGGAAACTCACTTTGACCCCAATCCACCTCCTGGGTCCATATTTGGGAATTTACACCTGAGTTTAAAGAAAGTTGTTTTATTCTTAGCCATTTATCTTGGTATGGGAACTATATGTTTCTACTTCGTCAGGAACCAAATCAAGGGGCTAAAAACAAATGGAATAATTGATGCTGTCTATTTCTGCATTGTTACAATGACCACAGTTGGATATGGAGACTTGGTGCCTAACTCTGTACTTACAAAACTACTTGCCTGTGCTTTTGTTTTCACAGGAATGGCCCTAATTGGACTCGTACTGAGCAAAGCCGCTGATTATTTAGCAGAAAAACAGGAAATGTTTTTGGTAAAAGCCTTACATTTACAACAAACTACTTCTCCTGGTGCGACTATGAAAGAAATTGAGACCAATAAAGTGAAATACAAGTGCATATTGGTCTTTTTCCTTTTGCTGGTGCTCATAATTTCTGGGACTATATTTTTAATTACGGTTGAAGAGTTGGACCCCGTTGATGCTTTTTATTGCGTCTGTTCTACCATTACAGCTCTAGGCTACGGGGACCGAAGTTTCTCGACTAGCGCTGGACGTGTTTTTGCAATATTCTGGATTTTGACCAGCACAATTTCTTTGGCTCAGTTTTTCTTTTACATCGCTGAGCTGCATTCTGAAAGAAGGCAAAGGGCATTGGTCAATTGGGTTCTAAACCGGAAAACAACATGCTTAGATCTTGAGGCAGCAGATTTGGATGATGATGGAGTTGTGGGGGCCGCCGAATTTGTCATATTTAAGCTAAAAGAAATGGGAAAATTTTCCCAAGATGACATTTCAGTTATCATGGAAGAGTTCGAGAATCTTGATGTTGATCAGTCGGGAACCTTAACAGTTTCTGATATAGAACAAGCTCAAGCATCTCAGAGAAAATTATGA 1068 39.89 MAFNGSEQPLLSGLLNPNCERKTMNVTMRKRRFRRTRSAPIVDSGPSQETHFDPNPPPGSIFGNLHLSLKKVVLFLAIYLGMGTICFYFVRNQIKGLKTNGIIDAVYFCIVTMTTVGYGDLVPNSVLTKLLACAFVFTGMALIGLVLSKAADYLAEKQEMFLVKALHLQQTTSPGATMKEIETNKVKYKCILVFFLLLVLIISGTIFLITVEELDPVDAFYCVCSTITALGYGDRSFSTSAGRVFAIFWILTSTISLAQFFFYIAELHSERRQRALVNWVLNRKTTCLDLEAADLDDDGVVGAAEFVIFKLKEMGKFSQDDISVIMEEFENLDVDQSGTLTVSDIEQAQASQRKL 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5782644 5783868 + Bda031024.1 Bda09g00436 12686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00436 355 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 20 345 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bda09g00436 355 MobiDBLite consensus disorder prediction 37 56 - -
Bda09g00436 355 Pfam Ion channel 75 155 IPR013099 -
Bda09g00436 355 Pfam Ion channel 196 266 IPR013099 -
Bda09g00436 355 ProSitePatterns EF-hand calcium-binding domain. 294 306 IPR018247 -
Bda09g00436 355 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Bda09g00436 355 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 20 345 - -
Bda09g00436 355 Gene3D - 65 160 - -
Bda09g00436 355 SUPERFAMILY EF-hand 278 348 IPR011992 -
Bda09g00436 355 SUPERFAMILY Voltage-gated potassium channels 67 162 - -
Bda09g00436 355 Gene3D - 172 279 - -
Bda09g00436 355 SUPERFAMILY Voltage-gated potassium channels 183 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00436 Bda-Chr9:5782644 Bda15g00854 Bda-Chr15:13401791 2.94E-55 dispersed
Bda09g00436 Bda-Chr9:5782644 Bda14g01437 Bda-Chr14:18739862 5.12E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00436 K05389 - tcc:108662931 451.825