Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00442 ATGTTTATTTGTCCAGGAGATTTGGGTGGCTCTGGTGGAAATGAGGAAATTGGAGGGAATATAGAGTCAACGCAGAGGACTGGGTTACCCAATTCACCCTCTTCTTCAGATCAGCAACCACAGAATCCTTTGCTGTTACTGGGGCAGTACAGTGATGATGAATTGGATGAGGACTTGAATAAAAGAGTGGATCATGAAACTGTTAAAAGTTCTCCGTCTGTTTGTGATGCTGAGGTTGCAGATCCTCTTATTGAAGGATGCAAGGATATGGATGTTACCACTGATGAAAACTTTGCTACCCCAAAAATCAATCAAGAGGAATTAGTGAGAAAATCGATTGATGTTTCTGAGAGTTCTGAAGCTGCCAGCAAAAGAGAAAATGATGCTGCCGTACATGGTGATCTAAATAAAGAAAGAGACGTCATTGAACAAGTATCTGTTGCTGGAACTTCTGACGCACAAGTTGTGGGGGATGTTAGTTCAGGCTGGAAGATAGTAATGCATGAAGAAAGTAATAGTTATTATTACTGGAATACTGAAACTGGGGAAACTTCATGGGAAGTACCTGATGTTTTGGCTCAGGTTCTTCAGCCAACTTCTGAGCAGAGTACCTTCCCTGAGAGTATTACCTTCCATAAACAGGAATCCAACTTAACTAATGGATCTTTAGGTGCAGATGCATCAAGTGGGTCTGTTGATGTTAGTAGCATGCCTGAATATACAGAAGTTTTTAGAAATGAATCCCAAATGAATGGCCTTGAAGGTTCAAATTTGCTATTTAATGCATACCAAAGTGAGTTACCTAGTAATTCTGAGTCTGCTAATGGATGTTTTGTTGACAAGAGTTCCTCAACACCTCCATCTGTACCTGCCAGATACATGCACAATATGGTAGTTACTGAAGAACATAAGTCAGTTTTTGATCTTCCTTCTCGGCTTATTAGTCAGAGCAGAAGTTTGTTAGATAGGTTGAAGTCATTAAAGGGGTCTAATTACCTGCAAGGTTATGATTGGACATTGAAGTACATTATGGAAATTCATACCAGACTTTCAGATTTCGAGGCGCTCCTATCCTGTGAAACATCTTTGCTCCCATATTGGGAGCATTCAGAAAGACAGCTCAAGCGGCTAGAATCTGCCATTAATGAGGAAATTTACCAGATGGCTGTATCTTCACAATTGGATGTCCACGCAACTGATTTTAAGTTGGAAGAAAACAGAAAATTGCAGTGCCTTTCTGAAGCAGAAAGAGTTAAAAGTGGAGCATCTACCTGTGAAGATACTCCAAATGCTGTTGTGCTAGTACTTGATCAAGCAGATCTTGAAAATGAAGCTCCAGTTGAACATCTTTCATCATTGGAAGCTGCAAAGGAGTTAGAAAGTCATTTGCAAGTGAGTGAACTAGTCAATGACAGTTTTTCTCATGAGTCAGCATTCAAGCATGCGTTGAATTCTGTAGAAGAGGTGGATATGGATGTAGACATGGAAGTTGAAGATTCTGATTCTGAGGAGAATAGAACTACAGATGTAGAGAGTGCAAAAGAAAAATCAGGTCATCCCGAGCCACCAGCAGGCAATACATCTGCTGTGCTGGAAGAAGGGCCTATTGTTCCTCCACCACCCGATGAAGAATGGATTCCTCCACCACCACCTTACGATGAAGATGTTCCTCTTCCCCCGCCTGATGATCCACTTGCCCCGTCACATCCTCTTCCCCCTTCTTACACACAAATTCCACCTCCTTTGTACACAGAGCAAATTAACATGCCATACTCAGATTCTAATTTTGAATATTATGGATTACCTGTTGCTGAGGTTTCAAACGCAAACTTCTATGGGCATTCTGATGTTCCTTTGCCTCACGCACCACTCTACTATGCAGCAGTTACTAATGCATATAGTGATACTGCTCCAATTATTGTGAACCCTTCTGAGTCCGAAGCTTATAAAGGATCTCAAGATGGACTGATACCTGGTCTTCCTTTGGTAATTAGTGCCGGGTCATCCCAATTGTTTCCTGTTTCTGCCTCTGGTGCCTTCAATAATTCTCCCCCTGGTCATGTTGAATCTACTGACGTAGCAAATGTGAAAGTTGATGTTTATTCTATTAGCGAGGCTGAGAAGGTTCATGGAGGAAGTACCACGGCTACCATTCAGGCTCCTTCCAATGTGACCATAAAAGACAACGATGCTTCATCACCAATTAATACCATTTCTGCTGCTCAAGCTACTTCTGCTGTATCAGCAGTTTCCAAGAGTCAATCAAAAGGTACTCGTAGCAAAAAGCGGACAGTTACAGTTGCTCCATCCTTAAGGTCTAATAAGAAAGTTTCGAGTTTGGTTGACAAGTGGAAAGCAGCAAAGGAAGAACTGCTTGAAGATGAGGAAGAACCAGAAACAGCATACGAGATGTTGGAAAGAAAGCGACAAAGGGAAATTGAGGCAAGTGAAATTATCGCCGAATGGCATGCTCTTCAGATAGCTAGTAGAGAGGCAAAGCAGAATGCTAATTTTCAGCCATTGGGTGGTGACTGGCGCGAACGAATAAAGCGCCGGAGAGATCAATCGGCCAAGCAAACTATACGGTCTTCTCCGGAAACCCCCCTCGATGGAAATGAGCAGCCGGATTTGATAGAGCTCTCGAGGAATCTTCCATCTGGGTGGCAGGCATACTGGGATGAATCCTCAAACAAGGTCTACTATGGTAACCTTGTAACCTCTGAGACAACTTGGACCTTACCCAAATGA 2748 42.43 MFICPGDLGGSGGNEEIGGNIESTQRTGLPNSPSSSDQQPQNPLLLLGQYSDDELDEDLNKRVDHETVKSSPSVCDAEVADPLIEGCKDMDVTTDENFATPKINQEELVRKSIDVSESSEAASKRENDAAVHGDLNKERDVIEQVSVAGTSDAQVVGDVSSGWKIVMHEESNSYYYWNTETGETSWEVPDVLAQVLQPTSEQSTFPESITFHKQESNLTNGSLGADASSGSVDVSSMPEYTEVFRNESQMNGLEGSNLLFNAYQSELPSNSESANGCFVDKSSSTPPSVPARYMHNMVVTEEHKSVFDLPSRLISQSRSLLDRLKSLKGSNYLQGYDWTLKYIMEIHTRLSDFEALLSCETSLLPYWEHSERQLKRLESAINEEIYQMAVSSQLDVHATDFKLEENRKLQCLSEAERVKSGASTCEDTPNAVVLVLDQADLENEAPVEHLSSLEAAKELESHLQVSELVNDSFSHESAFKHALNSVEEVDMDVDMEVEDSDSEENRTTDVESAKEKSGHPEPPAGNTSAVLEEGPIVPPPPDEEWIPPPPPYDEDVPLPPPDDPLAPSHPLPPSYTQIPPPLYTEQINMPYSDSNFEYYGLPVAEVSNANFYGHSDVPLPHAPLYYAAVTNAYSDTAPIIVNPSESEAYKGSQDGLIPGLPLVISAGSSQLFPVSASGAFNNSPPGHVESTDVANVKVDVYSISEAEKVHGGSTTATIQAPSNVTIKDNDASSPINTISAAQATSAVSAVSKSQSKGTRSKKRTVTVAPSLRSNKKVSSLVDKWKAAKEELLEDEEEPETAYEMLERKRQREIEASEIIAEWHALQIASREAKQNANFQPLGGDWRERIKRRRDQSAKQTIRSSPETPLDGNEQPDLIELSRNLPSGWQAYWDESSNKVYYGNLVTSETTWTLPK 915
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5839036 5844245 - Bda031032.1 Bda09g00442 12692

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00442 915 MobiDBLite consensus disorder prediction 17 46 - -
Bda09g00442 915 SMART ww_5 883 915 IPR001202 GO:0005515
Bda09g00442 915 SMART ww_5 158 191 IPR001202 GO:0005515
Bda09g00442 915 MobiDBLite consensus disorder prediction 1 57 - -
Bda09g00442 915 Gene3D - 158 198 - -
Bda09g00442 915 SUPERFAMILY WW domain 881 914 IPR036020 GO:0005515
Bda09g00442 915 PANTHER OS06G0298400 PROTEIN 5 914 - -
Bda09g00442 915 MobiDBLite consensus disorder prediction 495 576 - -
Bda09g00442 915 ProSitePatterns WW/rsp5/WWP domain signature. 163 189 IPR001202 GO:0005515
Bda09g00442 915 MobiDBLite consensus disorder prediction 852 876 - -
Bda09g00442 915 Pfam WW domain 161 189 IPR001202 GO:0005515
Bda09g00442 915 Pfam WW domain 884 914 IPR001202 GO:0005515
Bda09g00442 915 ProSitePatterns WW/rsp5/WWP domain signature. 888 914 IPR001202 GO:0005515
Bda09g00442 915 CDD WW 161 190 IPR001202 GO:0005515
Bda09g00442 915 MobiDBLite consensus disorder prediction 534 576 - -
Bda09g00442 915 CDD WW 885 914 IPR001202 GO:0005515
Bda09g00442 915 SUPERFAMILY WW domain 151 191 IPR036020 GO:0005515
Bda09g00442 915 MobiDBLite consensus disorder prediction 114 133 - -
Bda09g00442 915 ProSiteProfiles WW/rsp5/WWP domain profile. 157 191 IPR001202 GO:0005515
Bda09g00442 915 ProSiteProfiles WW/rsp5/WWP domain profile. 882 915 IPR001202 GO:0005515
Bda09g00442 915 Gene3D - 879 915 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00442 K24774 FNBP4; formin-binding protein 4 - zju:107416703 574.704
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda07g00423 Bda09g00442 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00423 Bda-Chr7:5418031 Bda09g00442 Bda-Chr9:5839036 8.88E-45 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g719 . . Bda07g00423 Bda09g00442 . . . . . . Cma01g01060 Cma09g01029 Car01g00934 Car09g00932 Sed04g3626 Cpe06g00836 Cpe02g00836 Bhi09g01804 Tan01g3218 Cmetu01g2692 . . Mch11g1304 . . . . . . . . . . . . Lsi02g01808 . . . . . . . Bpe11g00598 . . Bma14g00671 . Cmo01g01101 Cmo09g01031 . . . . . . . . . . . . . Cla09g02097 Cam09g2183 Cec09g2250 . . . . . . Chy01g01120 Cme01g00868
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004218 2 2 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 3 4 1 42