Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00480 | ACTTGTAATCCAGGAATGAGCCAACCTAAAGTAAAGCGTAGGGTAGGTAAATATGAGGTTGGAAGAACAATTGGCGAGGGGACATTCGCGAAAGTCAAATTTGCGAAGAATTCTGAGACGGGAGAATCTGTTGCCCTTAAAATACTCGATAAAGAGAAGGTTCTCAAGCACAAGATGGCCGAACAGATCAAGCGGGAGGTAGCAACAATGAAGTTGATAAAGCATCCGAATGTTGTGCGATTGTTTGAGGTAATGGGAAGCAGAACAAAAATCTTCATTGTTTTGGAGTTTGCCACTGGTGGGGAACTATTCGACAAAATTGTAAGCCATGGGCGTATGAGAGAAGATGAAGCAAGGCGATATTTTCAGCAGCTTATAAATGCAGTCGATTATTGTCACAGTAGGGGTGTCTACCATCGAGATCTTAAGCCAGAAAATCTGCTTTTAGATGCTCATGGAAACCTTAAAGTTTCCGATTTTGGATTGAGTGCGCTTTCTCAACAAGTTGGGGACGATGGCTTGCTTCACACTACTTGTGGAACTCCAAATTATGTTGCTCCCGAGGTCCTCAACGATAGAGGCTATGACGGGGCAACGGCGGACGTGTGGTCGTGTGGAGTCATACTCTTTGTACTCCTTGCAGGTTACTTGCCTTTTGATGATTCTAATCTTATGACCCTTTATAAGAAAATTTCTTCTGCTGAATTTACTTGTCCTCCATGGCTATCTTTCGAAGCCATGAAATTGATAGCTCGGATTTTGGATCCTAATCCTATCACGAGAATCTCGATATTTGAAATTTTAAGCAACGAATGGTTTAAGAAAGACTATAGTCCGCCTGTATTTGATGAGAAACAGGATGCGAATTTAGACGATGTGGAAGCCGTTTTCAAAGATTCAGAGGAACACCATGTGACAGAGAAGAAGGAAGAGCAGCCAGTTGCAATGAACGCCTTCGATCTAATATCCATGTCGAAAGGACTCAACCTCGGAAATTTGTTCGATGTAGAACAGCAGGAATTTAAGAGAGAAACTAGGTTTACATCTAAATGCCCTGCAAATGACATTATAAACAAGATACAAGACGCTGCCAAACCTCTAGGTTTTGATATACAAAAGAAGAACTACAAGATGCGGCTCGAAAATTTAAAAGCGGGACGGAAGGGAAACCTTAATATTGTGACAGAGATTTTTCAAGTGGCGCCCTCTCTTCACATGGTCGAGGTCCGAAAAGCAAAAGGCGACACTTTGGAGTTTCACAAGTTCTATAAAAACCTCTCGACTTCGTTGGACGACGTGGTGTGGAAGACGGAGGAAGACATGGAAAAAACTAAG | 1335 | 42.32 | TCNPGMSQPKVKRRVGKYEVGRTIGEGTFAKVKFAKNSETGESVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVRLFEVMGSRTKIFIVLEFATGGELFDKIVSHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAHGNLKVSDFGLSALSQQVGDDGLLHTTCGTPNYVAPEVLNDRGYDGATADVWSCGVILFVLLAGYLPFDDSNLMTLYKKISSAEFTCPPWLSFEAMKLIARILDPNPITRISIFEILSNEWFKKDYSPPVFDEKQDANLDDVEAVFKDSEEHHVTEKKEEQPVAMNAFDLISMSKGLNLGNLFDVEQQEFKRETRFTSKCPANDIINKIQDAAKPLGFDIQKKNYKMRLENLKAGRKGNLNIVTEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTSLDDVVWKTEEDMEKTK | 445 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6292252 | 6296833 | + | Bda034101 | Bda09g00480 | 12730 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00480 | 445 | Gene3D | Transferase(Phosphotransferase) domain 1 | 98 | 301 | - | - | |
Bda09g00480 | 445 | ProSiteProfiles | Protein kinase domain profile. | 18 | 273 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00480 | 445 | CDD | STKc_SnRK3 | 17 | 272 | - | - | |
Bda09g00480 | 445 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 97 | - | - | |
Bda09g00480 | 445 | ProSiteProfiles | NAF domain profile. | 311 | 335 | IPR018451 | GO:0007165 | |
Bda09g00480 | 445 | Pfam | Protein kinase domain | 18 | 273 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00480 | 445 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 | 7 | 438 | - | - | |
Bda09g00480 | 445 | SUPERFAMILY | Protein kinase-like (PK-like) | 14 | 300 | IPR011009 | - | |
Bda09g00480 | 445 | Pfam | NAF domain | 313 | 373 | IPR004041 | GO:0007165 | |
Bda09g00480 | 445 | CDD | CIPK_C | 317 | 427 | - | - | |
Bda09g00480 | 445 | PANTHER | - | 7 | 438 | - | - | |
Bda09g00480 | 445 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 137 | 149 | IPR008271 | GO:0004672|GO:0006468 | |
Bda09g00480 | 445 | Gene3D | Kinase associated domain 1, KA1 | 310 | 436 | - | - | |
Bda09g00480 | 445 | SMART | serkin_6 | 18 | 273 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00480 | 445 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00217 | Bda-Chr2:37984911 | Bda09g00480 | Bda-Chr9:6292252 | 0 | dispersed | |
Bda09g00480 | Bda-Chr9:6292252 | Bda13g00406 | Bda-Chr13:5008980 | 0 | dispersed | |
Bda14g01227 | Bda-Chr14:12401936 | Bda09g00480 | Bda-Chr9:6292252 | 2.13E-67 | dispersed | |
Bda07g00803 | Bda-Chr7:9522295 | Bda09g00480 | Bda-Chr9:6292252 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69794 | PF00069 | Pkinase | 5.10E-71 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00480 | - | - | zju:107410429 | 812.372 |