Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00480 ACTTGTAATCCAGGAATGAGCCAACCTAAAGTAAAGCGTAGGGTAGGTAAATATGAGGTTGGAAGAACAATTGGCGAGGGGACATTCGCGAAAGTCAAATTTGCGAAGAATTCTGAGACGGGAGAATCTGTTGCCCTTAAAATACTCGATAAAGAGAAGGTTCTCAAGCACAAGATGGCCGAACAGATCAAGCGGGAGGTAGCAACAATGAAGTTGATAAAGCATCCGAATGTTGTGCGATTGTTTGAGGTAATGGGAAGCAGAACAAAAATCTTCATTGTTTTGGAGTTTGCCACTGGTGGGGAACTATTCGACAAAATTGTAAGCCATGGGCGTATGAGAGAAGATGAAGCAAGGCGATATTTTCAGCAGCTTATAAATGCAGTCGATTATTGTCACAGTAGGGGTGTCTACCATCGAGATCTTAAGCCAGAAAATCTGCTTTTAGATGCTCATGGAAACCTTAAAGTTTCCGATTTTGGATTGAGTGCGCTTTCTCAACAAGTTGGGGACGATGGCTTGCTTCACACTACTTGTGGAACTCCAAATTATGTTGCTCCCGAGGTCCTCAACGATAGAGGCTATGACGGGGCAACGGCGGACGTGTGGTCGTGTGGAGTCATACTCTTTGTACTCCTTGCAGGTTACTTGCCTTTTGATGATTCTAATCTTATGACCCTTTATAAGAAAATTTCTTCTGCTGAATTTACTTGTCCTCCATGGCTATCTTTCGAAGCCATGAAATTGATAGCTCGGATTTTGGATCCTAATCCTATCACGAGAATCTCGATATTTGAAATTTTAAGCAACGAATGGTTTAAGAAAGACTATAGTCCGCCTGTATTTGATGAGAAACAGGATGCGAATTTAGACGATGTGGAAGCCGTTTTCAAAGATTCAGAGGAACACCATGTGACAGAGAAGAAGGAAGAGCAGCCAGTTGCAATGAACGCCTTCGATCTAATATCCATGTCGAAAGGACTCAACCTCGGAAATTTGTTCGATGTAGAACAGCAGGAATTTAAGAGAGAAACTAGGTTTACATCTAAATGCCCTGCAAATGACATTATAAACAAGATACAAGACGCTGCCAAACCTCTAGGTTTTGATATACAAAAGAAGAACTACAAGATGCGGCTCGAAAATTTAAAAGCGGGACGGAAGGGAAACCTTAATATTGTGACAGAGATTTTTCAAGTGGCGCCCTCTCTTCACATGGTCGAGGTCCGAAAAGCAAAAGGCGACACTTTGGAGTTTCACAAGTTCTATAAAAACCTCTCGACTTCGTTGGACGACGTGGTGTGGAAGACGGAGGAAGACATGGAAAAAACTAAG 1335 42.32 TCNPGMSQPKVKRRVGKYEVGRTIGEGTFAKVKFAKNSETGESVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVRLFEVMGSRTKIFIVLEFATGGELFDKIVSHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAHGNLKVSDFGLSALSQQVGDDGLLHTTCGTPNYVAPEVLNDRGYDGATADVWSCGVILFVLLAGYLPFDDSNLMTLYKKISSAEFTCPPWLSFEAMKLIARILDPNPITRISIFEILSNEWFKKDYSPPVFDEKQDANLDDVEAVFKDSEEHHVTEKKEEQPVAMNAFDLISMSKGLNLGNLFDVEQQEFKRETRFTSKCPANDIINKIQDAAKPLGFDIQKKNYKMRLENLKAGRKGNLNIVTEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTSLDDVVWKTEEDMEKTK 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6292252 6296833 + Bda034101 Bda09g00480 12730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00480 445 Gene3D Transferase(Phosphotransferase) domain 1 98 301 - -
Bda09g00480 445 ProSiteProfiles Protein kinase domain profile. 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00480 445 CDD STKc_SnRK3 17 272 - -
Bda09g00480 445 Gene3D Phosphorylase Kinase; domain 1 7 97 - -
Bda09g00480 445 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Bda09g00480 445 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00480 445 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 7 438 - -
Bda09g00480 445 SUPERFAMILY Protein kinase-like (PK-like) 14 300 IPR011009 -
Bda09g00480 445 Pfam NAF domain 313 373 IPR004041 GO:0007165
Bda09g00480 445 CDD CIPK_C 317 427 - -
Bda09g00480 445 PANTHER - 7 438 - -
Bda09g00480 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Bda09g00480 445 Gene3D Kinase associated domain 1, KA1 310 436 - -
Bda09g00480 445 SMART serkin_6 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00480 445 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00217 Bda-Chr2:37984911 Bda09g00480 Bda-Chr9:6292252 0 dispersed
Bda09g00480 Bda-Chr9:6292252 Bda13g00406 Bda-Chr13:5008980 0 dispersed
Bda14g01227 Bda-Chr14:12401936 Bda09g00480 Bda-Chr9:6292252 2.13E-67 dispersed
Bda07g00803 Bda-Chr7:9522295 Bda09g00480 Bda-Chr9:6292252 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69794 PF00069 Pkinase 5.10E-71 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00480 - - zju:107410429 812.372