Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00506 ATGGAGAATCCGGCTACCCTACATCCCGGGATGGGAAGTATTCCAAAAGCAATGGAAGGTGAGCAGATTGCTGGTGGTTGGCCTTCTTGGCTAGCTGCTGTTGCAGGTGAAGCGATCAGGGGATGGTTACCACGACGGGCTGATTCTTTCGAGCGGCTGGATAAAATTGGCCAGGGTACGTATAGCAACGTTTATAGGGCTCGTGATCTTGATCAAAAGAAAATCGTTGCTTTGAAAAAAGTTCGATTTGACAATCTGGAACCTGAAAGTGTTCGCTTTATGGCCAGGGAGATTAACATTTTACGAAGACTTAATCATCCAAATGTAATTAAGTTAGAAGGTCTAGTTACTTCGAGAATGTCTTGCACCTTATACCTTGTCTTTGAGTACATGGAGCATGACTTGACCGGGCTAGCCTCTCTCCCTGGACTGAAGTTTACTGAAGCGCAGGTCAAATGTTACATGCAGCAACTATTACGTGGGCTCGAGCACTGCCACAGTTACAACATTCTGCATCGTGACATCAAAGGTTCCAATCTTCTCATCGATAATAATGGCGTCCTAAAAATTGCGGATTTTGGGCTGGCAAGTTTCTATGATCCAAATCAAAGTCAGCCACTCACTAGCCGTGTTGTCACTCTTTGGTATCGGCCGCCAGAGCTATTACTCGGAGCAACCTACTATGGGACTGCTGTGGATTTATGGAGCACAGGATGCATACTTGCTGAACTTTATGCTGGCAAGCCTATTATGCCTGGAAGAACTGAGGTGGAGCAGCTGCATAAAATATTCAAACTTTGTGGCTCTCCTTCTGAGGAATATTGGAGAAAGTCGAAGTTGCCGCATGCAACTATCTTTAAGCCCCAGCATCCCTATAAACGATGCGTGGGAGAAACATTCAAGGACTTTCCGGCTCCAGCCTTGGCACTTATTGAAACTCTACTTTCTATAGATCCTGCTGATCGGCAATCTGCAACGTTTGCCCTCAACAGTGAGTTTTTTACCACAAAACCACTTCCTAGTGACCCGTTAAGCTTGCCAAAATATCCTCCCAGCAAAGAGTTTGATGCAAAACTACGAGATGAAGAAGCTAGAAGACAAGGAGCAGCTGCTGGAGGCCAGGGCCAGAGACTTGAACTTGAAAGAAAAGGAACAAGAGAGTCTCGAGCTATTCCAGCTCCCGATGCCAATGCCGAATTAGCATTGTCAATGCAGAGAAGGCAAAGTCAGTCGAATTCAAAGAGTCGGAGTGAGAAGTTTAACCCTCACGCAGAAGAAGTTGCATCTGGGTTTCCAATCGACCCACCCAGGCCGTCACAAGTCACAGAAGCGAGAGTCGATTCTCAGGTCCATCATTCGAAGAGAGCCTCTCATTCTGGGCCACTGGCTCAGAGAGCTGCCTGGGCTAAGACTGGCAAGAACCACGACGAAGCTCCCAAAATCTCAGCCGGACCCGATGTGCCTATTATGCCGGGACTTGTGGCTGCAAGGAGGAGTATGCTGACCTATGATCGGAGAGAAAGGCCGGGTCCCACCCAGGCAGAAGCTCAAAAACTAATGTGCAGATTTCCTGGATCCTTCAAAGAACATTCTGAACCATTGGCCTCCCAGGATCAAAAACATAATCCTCAAGATGTTACTGGTTCTTATAAAAAAGACGACGGAAAAGTTGGCTCGAAAGATCCTATTCTCATTGGTTACGGTTCAAAGGGTCACAAAATTCATTACTCCGGTCCATTGCTGGTTCCTTCTGGAAACGTGGATCAGATGTTAAAGGACCATGATCGCCATATCCAAGAGGCTGTTCGACGAGCTCGGCTCGACAAGGCAAAGATAAGAAAGACTCAAGCTGAAGGTAATCATACTTCAAACAATCCATTATTTATTTCGGGTCGTTGA 1899 46.6 MENPATLHPGMGSIPKAMEGEQIAGGWPSWLAAVAGEAIRGWLPRRADSFERLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREINILRRLNHPNVIKLEGLVTSRMSCTLYLVFEYMEHDLTGLASLPGLKFTEAQVKCYMQQLLRGLEHCHSYNILHRDIKGSNLLIDNNGVLKIADFGLASFYDPNQSQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSKLPHATIFKPQHPYKRCVGETFKDFPAPALALIETLLSIDPADRQSATFALNSEFFTTKPLPSDPLSLPKYPPSKEFDAKLRDEEARRQGAAAGGQGQRLELERKGTRESRAIPAPDANAELALSMQRRQSQSNSKSRSEKFNPHAEEVASGFPIDPPRPSQVTEARVDSQVHHSKRASHSGPLAQRAAWAKTGKNHDEAPKISAGPDVPIMPGLVAARRSMLTYDRRERPGPTQAEAQKLMCRFPGSFKEHSEPLASQDQKHNPQDVTGSYKKDDGKVGSKDPILIGYGSKGHKIHYSGPLLVPSGNVDQMLKDHDRHIQEAVRRARLDKAKIRKTQAEGNHTSNNPLFISGR 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6707338 6711759 + Bda031105.1 Bda09g00506 12756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00506 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Bda09g00506 632 SMART serkin_6 50 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00506 632 MobiDBLite consensus disorder prediction 402 417 - -
Bda09g00506 632 SUPERFAMILY Protein kinase-like (PK-like) 44 340 IPR011009 -
Bda09g00506 632 PANTHER CYCLIN-DEPENDENT KINASE 12 614 - -
Bda09g00506 632 CDD STKc_CDK9_like 50 334 - -
Bda09g00506 632 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Bda09g00506 632 ProSiteProfiles Protein kinase domain profile. 50 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00506 632 Gene3D Transferase(Phosphotransferase) domain 1 133 372 - -
Bda09g00506 632 MobiDBLite consensus disorder prediction 545 559 - -
Bda09g00506 632 PANTHER CELL DIVISION PROTEIN KINASE 12 614 - -
Bda09g00506 632 MobiDBLite consensus disorder prediction 528 561 - -
Bda09g00506 632 Pfam Protein kinase domain 50 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00506 632 Gene3D Phosphorylase Kinase; domain 1 37 132 - -
Bda09g00506 632 MobiDBLite consensus disorder prediction 362 486 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00297 Bda09g00506 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00303 Bda-Chr6:5007300 Bda09g00506 Bda-Chr9:6707338 0 dispersed
Bda09g00506 Bda-Chr9:6707338 Bda13g00161 Bda-Chr13:2092316 0 dispersed
Bda13g00667 Bda-Chr13:7607692 Bda09g00506 Bda-Chr9:6707338 7.14E-171 dispersed
Bda10g01151 Bda-Chr10:45572664 Bda09g00506 Bda-Chr9:6707338 0 transposed
Bda07g00297 Bda-Chr7:4073929 Bda09g00506 Bda-Chr9:6707338 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69795 PF00069 Pkinase 2.80E-69 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00506 - - cit:102626724 1014.99