Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00567 ATGGCTGGTCAATCTGATCCTCATCTCTCTCTATTTTCACCTGAAGAGGTAGAGTTTGTGGCTGAAGATGAGATCGTTGAAATTGTTCCTAACATGAGAATGGATTCCCTCAATTTGATCTGTGGTGATTATGGTCCATTCTTCCCTCAACTAGTGGCTCAAGTACCGTTGTGGCTAGCAATTGCTTTGAAAAAAAGAGGGAAATGTGCTATCCGGTCTCCAGAATGGATGTCTATCGAAAAGTTGACTCAAATTTTAGAAGCAGAACGAGAGTCTAAAGGAGCATTCCAGATACTACCATTTCATTATGTAGAAATCTCAAAGCTTCTTTTCGACCATGCACATAACGACATACAAGACATATACATGGTGAGATCTCTTGTCGAAGATATTAAAGATGTTAGGTTTCACAAGGTTGAAACTAGCTTAGAGGCAATTGATACACGAACATCTGCAGTAAAGATTAAAGATCTGTCTGCCATGGAAGTAAATATTGTTCGCCCATTTGTTATCAGATCACTACAAGCAATCTATAATCATGGTAGCCCCGAGTTGGTTCCAAACCAAGAGAGAGTGTCCGGCAGAGTACAGCAAGAGCATGATCCTCGTCAAAGACGGACTCTACGAAGGTGA 633 40.92 MAGQSDPHLSLFSPEEVEFVAEDEIVEIVPNMRMDSLNLICGDYGPFFPQLVAQVPLWLAIALKKRGKCAIRSPEWMSIEKLTQILEAERESKGAFQILPFHYVEISKLLFDHAHNDIQDIYMVRSLVEDIKDVRFHKVETSLEAIDTRTSAVKIKDLSAMEVNIVRPFVIRSLQAIYNHGSPELVPNQERVSGRVQQEHDPRQRRTLRR 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7828022 7830554 + Bda031186.1 Bda09g00567 12817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00567 210 CDD GINS_A_psf2 66 182 - -
Bda09g00567 210 Pfam GINS complex protein 54 162 IPR021151 -
Bda09g00567 210 Gene3D - 12 77 - -
Bda09g00567 210 SUPERFAMILY GINS helical bundle-like 74 181 IPR036224 -
Bda09g00567 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Bda09g00567 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 194 IPR007257 GO:0005634|GO:0006260
Bda09g00567 210 Gene3D - 78 199 - -
Bda09g00567 210 MobiDBLite consensus disorder prediction 194 210 - -
Bda09g00567 210 MobiDBLite consensus disorder prediction 185 210 - -
Bda09g00567 210 PIRSF GINS_PSF2 2 210 IPR007257 GO:0005634|GO:0006260
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00567 Bda-Chr9:7828022 Bda11g01457 Bda-Chr11:20372461 2.52E-145 dispersed
Bda09g00567 Bda-Chr9:7828022 Bda09g00575 Bda-Chr9:8036192 1.45E-153 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00567 K10733 - csv:101212053 348.206