Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00575 ATGGCTGGTCAATCTGATCCTCATCTCTCTCTATTTTCACCTGAAGAGGTAGAGTTTGTGGCTGAAGATGAGATCGTTGAAATTGTTCCTAACATGAGAATGGATTCCCTCAATTTGATCTGTGGTGATTATGGTCCATTCTTCCCTCAACTAGTGGCTCAAGTACCATTGTGGCTAGCAATTGCTTTGAAAAAAAGAGGGAAATGTGCTATCCGGTCTCCAGAATGGATGTCTATCGAAAAGTTGACTCAAATTTTAGAAGCAGAACGAGAGTCTAAAGGAGCATTCCAGATACTACCATTTCATTATGTGGAAATCTCAAAGCTTCTTTTCGACCATGCACATAACGACATACAAGACATATACATGGTGAGATCTCTTGTCGAAGATATTAAAGATGTTAGGTTTCACAAGGTTGAAACTAGCTTAGAGGCAATTGATACACGAACATCTGCAGTAAAGATTAAAGATCTGTCTGCCATGGAAGTAAATATTGTTCGCCCATTTGTTATCAGATCACTACAAGCAATCTATAATCATGGTAGCCCCGAGTTGGTTCCAAACCAAGAGAGAGTGTCTGGCAGAGTACAGCAAGAGCATGATCCTCGTCAAAGAGTAAGTTCTTTTCTAATTTTAATATTCTCATGA 648 39.35 MAGQSDPHLSLFSPEEVEFVAEDEIVEIVPNMRMDSLNLICGDYGPFFPQLVAQVPLWLAIALKKRGKCAIRSPEWMSIEKLTQILEAERESKGAFQILPFHYVEISKLLFDHAHNDIQDIYMVRSLVEDIKDVRFHKVETSLEAIDTRTSAVKIKDLSAMEVNIVRPFVIRSLQAIYNHGSPELVPNQERVSGRVQQEHDPRQRVSSFLILIFS 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8036192 8038184 - Bda031197.1 Bda09g00575 12825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00575 215 CDD GINS_A_psf2 66 182 - -
Bda09g00575 215 Pfam GINS complex protein 54 162 IPR021151 -
Bda09g00575 215 SUPERFAMILY PriA/YqbF domain 12 71 - -
Bda09g00575 215 PIRSF GINS_PSF2 2 209 IPR007257 GO:0005634|GO:0006260
Bda09g00575 215 Gene3D - 78 191 - -
Bda09g00575 215 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 195 IPR007257 GO:0005634|GO:0006260
Bda09g00575 215 SUPERFAMILY GINS helical bundle-like 74 181 IPR036224 -
Bda09g00575 215 Gene3D - 12 77 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00222 Bda-Chr6:3792777 Bda09g00575 Bda-Chr9:8036192 2.55E-155 dispersed
Bda08g00710 Bda-Chr8:7876721 Bda09g00575 Bda-Chr9:8036192 3.00E-153 dispersed
Bda09g00575 Bda-Chr9:8036192 Bda11g01457 Bda-Chr11:20372461 6.06E-150 dispersed
Bda09g00567 Bda-Chr9:7828022 Bda09g00575 Bda-Chr9:8036192 1.45E-153 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00575 K10733 - csv:101212053 345.895