Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda09g00576 | ATGGACAGATTAGATCGAGCTCTTCTCCCCTTCTTCTGGCTACTTCTCGTTCTACTTCCGGCGATCGTTAAAGGGGAGTGTACCTGCGACAGCGGAGAAGAAGAAGAAGGTCGGGACAAAACCCAAGCTCTTAAATACAAACTCGCCGCCATAGCCGCTATTCTCGTCGCCAGCGCAATCGGAGTTGCCATTCCGATTCTCGGTAAAACTATTTCGGCTTTGCGGCCGGAGAAGAACATCTTCTTTATCATCAAAGCTTTTGCCGCTGGCGTCATATTAGCGACGGGGTTTATTCACGTTCTTCCCGATGCTTTCGAAAACCTTACTTCGCCGTGTTTGAGCGAGAATCCATGGGGGAATTTTCCGTTCACTGGTTTCGTAGCAATGATGTCGGCGATAGGAACTCTCATGGTGGACGCGTATGCTACTTCTTACTTCGGAAAATCCCGGCTCAGCAAGGCATTGCCGGAAAAGGCGGACGAAGAGCGAGTTGGAGATACGAATGGAATTCATACACATGCAACTCACGGCCATTCCCACGGTCCTGTTGATCCTTCCGGTGAAACGGAGCTTCTCCGTCACCGAGTTATTTCACAGGTACTGGAGTTGGGAATAGTGGTGCATTCAGTGATAATAGGAATATCACTGGGCGCCTCAGAAAGTCCGGCGACGATCAAACCTCTGGTAGCTGCTCTCACGTTCCATCAATTTTTTGAAGGCATGGGTCTTGGCGGCTGCATTTCTCAGGCAAAATTCAAGAACAAAGCTGTAGTGATAATGGGGTTGTTCTTCGCTCTAACAACGCCGGTAGGAATAGCGATAGGGATAGGAATATCGAATATTTACAACGAAAATAGCCCGAATGCCCTGATAGTGGAAGGGATATTCAATGCAGCCTCAGCAGGAATTCTAATCTACATGGCGCTTGTTGATCTACTTGCTGCTGATTTCATGAACCCTAGAATGATGTCTAATGGGAAGCTTCAACTTGGGGCCAATTTCTCCCTTCTTTTAGGCGCTGGTTGTATGTCACTTTTGGCTAAATGGGCTTAG | 1053 | 48.05 | MDRLDRALLPFFWLLLVLLPAIVKGECTCDSGEEEEGRDKTQALKYKLAAIAAILVASAIGVAIPILGKTISALRPEKNIFFIIKAFAAGVILATGFIHVLPDAFENLTSPCLSENPWGNFPFTGFVAMMSAIGTLMVDAYATSYFGKSRLSKALPEKADEERVGDTNGIHTHATHGHSHGPVDPSGETELLRHRVISQVLELGIVVHSVIIGISLGASESPATIKPLVAALTFHQFFEGMGLGGCISQAKFKNKAVVIMGLFFALTTPVGIAIGIGISNIYNENSPNALIVEGIFNAASAGILIYMALVDLLAADFMNPRMMSNGKLQLGANFSLLLGAGCMSLLAKWA | 350 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 8064813 | 8066380 | - | Bda031198.1 | Bda09g00576 | 12826 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda09g00576 | 350 | TIGRFAM | zip: ZIP zinc/iron transport family | 29 | 350 | IPR004698 | GO:0005385|GO:0016021|GO:0071577 | |
| Bda09g00576 | 350 | PANTHER | ZINC TRANSPORTER 1 | 15 | 350 | - | - | |
| Bda09g00576 | 350 | Pfam | ZIP Zinc transporter | 45 | 347 | IPR003689 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
| Bda09g00576 | 350 | PANTHER | ZINC/IRON TRANSPORTER | 15 | 350 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g01328 | Bda-Chr1:48894238 | Bda09g00576 | Bda-Chr9:8064813 | 6.85E-99 | dispersed | |
| Bda07g00889 | Bda-Chr7:10399557 | Bda09g00576 | Bda-Chr9:8064813 | 7.94E-114 | dispersed | |
| Bda09g00120 | Bda-Chr9:2037040 | Bda09g00576 | Bda-Chr9:8064813 | 1.64E-72 | dispersed | |
| Bda09g00127 | Bda-Chr9:2085652 | Bda09g00576 | Bda-Chr9:8064813 | 3.64E-78 | dispersed | |
| Bda09g00434 | Bda-Chr9:5767452 | Bda09g00576 | Bda-Chr9:8064813 | 1.21E-07 | dispersed | |
| Bda09g00576 | Bda-Chr9:8064813 | Bda14g00494 | Bda-Chr14:3589392 | 2.04E-139 | dispersed | |
| Bda09g00576 | Bda-Chr9:8064813 | Bda13g01602 | Bda-Chr13:39575469 | 1.30E-96 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda09g00576 | K14709 | - | qsu:112037227 | 493.426 |