Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00589 ATGGCGGTCCGAACGTGGCTGCTATGGATTAAAGTGATTTCTCTGTTGTGGTTAACGCAAGGAATAGTTTCTCAAGCATCATCATCAACGGCGAAGCCTGGTTGTGAAAATTTCTGCGGAAATGTCGAAATACCGTACCCTTTTGGTATGGGAAGCAATTGTTCTGTCAGCGAGTGGTTTTCCATCGACTGCAACCGTGCCACCACTCCTCCGAAGCCGTTTTTGAGCAATCTTCAGAGGGAAGTGACGGCTATTTCTTTGAACGGAACTATTTCTGTCAATTTTCCTTTAACGTCGAGCTGCAACTCAACCGTTCAGTCTGTAAACTTGACCGGAACCCCTTTTGTGTTTTCCGAATTATACAACAAATTTATTGGTGTGGGTTGTAATAACCTAGCTTTAATGGTTGTCAATGCTTCCGATGTGAATACTACCAATACGATTGGTGGGTGTCTGTCTCTTTGCAATAGTAGGACGCTTGCCGACGGAGCTTACACCTGCAATGGAATTGACTGTTGTCAAACCACTATCCCTTCTGATCTCAAGGTGTTCGACGTAAATCTCACGAGAGTACTATGGGAAGAAGACGAAAAGGGTTGCAAATATGGATTCTTGGCGAATCAGACCTGGTTTAATTCCAATATTTCACGTCTTTCAAACTTGGAAAGTCGGAAATTAGTGCCGGCTGTGCTTGAATGGAGTATCCCAGAGAACATGCTTAGTTTGCTTACCGGCACTTCTAATTCAACTTATTGTGGAAATACTTCTCTCCTCAACTCATCGTCGTTAGGGAATCCAAGTTCACAAAACATTTGTTATTGCAAACTGGGATATGAAGGAAATCCTTATCTTTCTAATGGATGCCAAGATGTGGATGAATGCAAGAATCCAGCCTTGTTTAACCCTGTCCGTTTTCCCGGTAGAACATTAGTTTGCCTAAATACTGTTGGGAGTTATAGGGTTTTTATTATAGAGGAGCCTCCCAATCGAACTCAGGCTATCGGCATAGGCGTCGGGGCCGCTTCCGGAGTGTTGATTCTACTCTTTGGAGGGTGGGGGCTACACAAAGGGGTTAAGAGAAGAAAGAAAGCTAAACAAAAGGAAAAGTTCTTCAAGAGAAATGGAGGATTGTTGTTGAAGCAGCAACTAGCTGAAGGGGAATTAAACGTCGATAAAACCAAGCTATTTGATTCGAAGGAGCTCGAGAAGGCCACAGATCGATTCAATGCAGATCGTATTTTGGGTCAAGGAGGGCAGGGTACTGTCTACAAAGGAATGCTAACTGATGGGAAGATAGTGGCCGTGAAGAAATCGAAGAAGGTCGACGAAAGCAAGATAGAGGAGTTCGTCAATGAAGTCGTGATTTTGTCGCAGATCAATCACAGAAATATAGTGAAGCTGATGGGGTGTTGTTTGGAGACTGAGGTTCCATTGCTAGTCTATGAGTTCATTCCAAATGGATCACTTTTTAACTATCTCCATCACCCAAATGAAGATGAGCTTCCTCTCACTTGGGATATAAGGATGAGAATTGCCACTGAAATTGCAGGCGCCCTTTTCTACTTGCACTCTGCAGCCTCCCAGCCTATCTATCACAGAGACATAAAGTCCTCCAACATTCTCTTGGATGAAAAATATCGGGCCAAAATAGCTGACTTCGGCACCTCAAGGTCGGTCGCCATCGACCAAACCCACCTCACCACCCAAGTGCAGGGCACTTTCGGCTACTTGGATCCTGAGTTCTTCCAGTCCAGCCAGTTCACCGAAAAGAGTGACGTTTACAGCTTTGGGGTCGTTTTGGTCGAGCTTTTGACTGGGCAAGCGCCGATTTCTACAAAAAGATCAATGGAAGGAACAAGTTTGGCCTTTTATTTCATTGATTCTATGAATGGAAACGCACTTTTCGACATTCTTGATGACAGAGTTGTCAAGGAAGGCAAGCGAGAAGATATCATTGTAGTTGCGAATCTTGCAAAAAGATGTTTGAGCTTGAACGGAAGAGCTCGTCCAACGATGAAGGAAGTTGTCGTGGAGCTCGATTCCGTCCAGATGACGCAAAAAGCGCTTGTCGTTGGAAATAGTCGAGAGGGAGATGAATTTGTGATGACAGAAGAAACTCTGGCTTGGGAGGAAGACATTTCTATGTCAACGAGGTCTGATTTGAATAGTGATACGTTTAGATTGTTAGAACCTTAA 2196 44.08 MAVRTWLLWIKVISLLWLTQGIVSQASSSTAKPGCENFCGNVEIPYPFGMGSNCSVSEWFSIDCNRATTPPKPFLSNLQREVTAISLNGTISVNFPLTSSCNSTVQSVNLTGTPFVFSELYNKFIGVGCNNLALMVVNASDVNTTNTIGGCLSLCNSRTLADGAYTCNGIDCCQTTIPSDLKVFDVNLTRVLWEEDEKGCKYGFLANQTWFNSNISRLSNLESRKLVPAVLEWSIPENMLSLLTGTSNSTYCGNTSLLNSSSLGNPSSQNICYCKLGYEGNPYLSNGCQDVDECKNPALFNPVRFPGRTLVCLNTVGSYRVFIIEEPPNRTQAIGIGVGAASGVLILLFGGWGLHKGVKRRKKAKQKEKFFKRNGGLLLKQQLAEGELNVDKTKLFDSKELEKATDRFNADRILGQGGQGTVYKGMLTDGKIVAVKKSKKVDESKIEEFVNEVVILSQINHRNIVKLMGCCLETEVPLLVYEFIPNGSLFNYLHHPNEDELPLTWDIRMRIATEIAGALFYLHSAASQPIYHRDIKSSNILLDEKYRAKIADFGTSRSVAIDQTHLTTQVQGTFGYLDPEFFQSSQFTEKSDVYSFGVVLVELLTGQAPISTKRSMEGTSLAFYFIDSMNGNALFDILDDRVVKEGKREDIIVVANLAKRCLSLNGRARPTMKEVVVELDSVQMTQKALVVGNSREGDEFVMTEETLAWEEDISMSTRSDLNSDTFRLLEP 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8332568 8335056 - Bda031220.1 Bda09g00589 12839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00589 731 ProSiteProfiles Protein kinase domain profile. 408 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00589 731 Pfam Protein kinase domain 409 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00589 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Bda09g00589 731 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 699 IPR045274 GO:0007166
Bda09g00589 731 SMART serkin_6 408 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00589 731 Gene3D Laminin 249 322 - -
Bda09g00589 731 SUPERFAMILY Protein kinase-like (PK-like) 392 679 IPR011009 -
Bda09g00589 731 Gene3D Transferase(Phosphotransferase) domain 1 484 702 - -
Bda09g00589 731 Gene3D Phosphorylase Kinase; domain 1 379 483 - -
Bda09g00589 731 Pfam Wall-associated kinase 166 274 IPR013695 GO:0004674|GO:0016021
Bda09g00589 731 Pfam Wall-associated receptor kinase galacturonan-binding 35 93 IPR025287 GO:0030247
Bda09g00589 731 CDD STKc_IRAK 414 680 - -
Bda09g00589 731 PANTHER - 19 699 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00589 Bda-Chr9:8332568 Bda09g00592 Bda-Chr9:8439454 0 dispersed
Bda09g00589 Bda-Chr9:8332568 Bda09g00590 Bda-Chr9:8402822 0 tandem
Bda07g00295 Bda-Chr7:4048249 Bda09g00589 Bda-Chr9:8332568 0 transposed
Bda11g00947 Bda-Chr11:9235632 Bda09g00589 Bda-Chr9:8332568 0 transposed
Bda13g00297 Bda-Chr13:3743246 Bda09g00589 Bda-Chr9:8332568 3.04E-42 transposed
Bda07g00204 Bda-Chr7:2432235 Bda09g00589 Bda-Chr9:8332568 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69797 PF00069 Pkinase 4.10E-52 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00589 - - qsu:111985753 742.265