Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00590 ATGGCGGTCCGAACGTGGGTGCTATGGATTAAAGTGATTTCTCTGTTGTGGTTGACGCCGGGAATTGTTTCTCAAGCATCATCATCAACTGCGAAGCCTGGTTGTGAAAATTTCTGCGGAAATGTCGAAATACCGTACCCTTTTGGTATGGGAATCAATTGCTCTCTCGGAGAGTGGTTTTCCATCGACTGCAACCGTGCCACCACTCCTCCGAAGCCGTTTTTGAGCAATCTTCAGAGGGAAGTGACGGCTATTTCTGTGAACGGAACTATTTCTATCAATTTTCCGTTAACGTCGAGCTGCAGCTCAACCGTTCAGTCTGTAAACTTGACCGGAACCCCTTTTGTGTTCTCCGAATCATACAACAAATTTATTGGTGTGGGTTGTAATAACCTAGCTTTAATGGTTTTCAATGCTTCGGATGTGAATACTACGAATACGATTGGTGGGTGTCTGTCTCTTTGCAATAATAAGACGCTTACCAACGGAGCTTACACCTGCAATGGAATGGACTGTTGCCAAACCGCTATCCCTTCTGATCTCAAGGTGTTCGACGTAAATCTCACGAGAGTACTATGGGAAGAAGACGAAAAGGGTTGCAAATATGGATTCTTGGCGAATCAGACCTGGTTTAATTCCAATATTTCACGTCTTTCAAACTTAGAAAGTCTGAAATTAGTGCCGGCTGTGCTTGAATGGAGTATCCCAGAGAACATGCTTAGTTTGCTTACCGGCACCTCTAATTCAACTTATTGTGGAAATACTTCTCCCCTAAACTCATCGTCGTTAGGGAATCCAAGTTCACAAAACATTTGTTTTTGCAATCTGGGATATGAAGGAAATCCTTATCTTTCTAATGGATGCCAAGATGTGGATGAATGCAAGAATCCAGCCTTGTTTAATCCTGTCCGTTTTCCCGGTAGAACATTAGTTTGCCTAAATACTGTTGGGAGTTACAGGGTTTTTATTATAGAGGAGCCTACCGATCGAACTCAGGCTATTGGCATAGGTGTCGGGGCCGCTTCCGGAGTGTTGATTCTTCTCTTTGGAGGGTGGGGGCTACACAAAGGGGTTAAGAGAAGGAAGAAAGCTAAACAAAAGGAACAGTTCTTCAAGAGAAATGGAGGATTGTTGTTGAAGCAGCAACTAGCAGAAGGGGAATTCAACGTCGAGAAAACCAAGCTATTTGATTCGAAGGAGCTCGAGAAGGCCACAGATCGGTTCAATACAAATCGTATTTTGGGTCAAGGAGGGCAGGGTACTGTCTACAAAGGCATGCTAGCAGATGGGAAGATAGTGGCGGTGAAGAAATCGAAGAGGGTCGACGAAAGCAAGATAGAGGAGTTCGTCAATGAAGTCGTGATTTTGTCGCAGATCAATCACAGAAATATAGTGAAGCTGATGGGGTGTTGTTTGGAGACTGAGGTTCCATTGCTAGTCTATGAGTTCATTCCAAATGGAACGCTTTTTAACTATCTCCATCACCCAAATGAAGATGAGCTTCCTCTAACTTGGGATATGAGGATGAGAATTGCCACTGAAATTGCAGGCGCCCTTTTCTACTTGCACTCTGCAGCCTCCCAGCCTATCTATCACAGAGACATAAAGTCCTCTAACATTCTCTTGGACGAAAAATACCGGGCCAAAATAGCCGACTTCGGCACCTCAAGGTCGGTCGCCATCGACCAAACCCACCTCACCACCAAAGTACAGGGCACTTTTGGCTACTTGGATCCCGAGTTCTTCCAGTCCAGCCAGTTCACCGAAAAGAGCGATGTTTACAGCTTCGGGGTTGTTCTGGTCGAGCTTTTGACCGGGCAAGCGCCAATTTCTATGAAGAGATCGATGGAAGGAACTAGTTTGGCCTTTTATTTCATTGATTCTATGAATGGAAACACACTTTTCGACATTCTTGATGACAGAGTTATCAAGGAAGGCAAACGAGAATATATCATTGTTGTTGCGAACCTTGCAAAAAGATGCTTGAACTTGAATGGAAGAGCTCGGCCAACGATGAAAGAAGTTGTCGTGGAGCTCGATTCCGTCCAGATGACGCAAAAAGAACTTGTCGTTGGAAATAGTCAAGAGGTGGATGAATTTGTGATGACAGAAGAAACTCTCGGTTGGGAGGAAGACATTTCTATGCCAACAAGGTCTGATTTGAACAGTGATACTTTTAGTCTGTTACCTTAA 2193 44.32 MAVRTWVLWIKVISLLWLTPGIVSQASSSTAKPGCENFCGNVEIPYPFGMGINCSLGEWFSIDCNRATTPPKPFLSNLQREVTAISVNGTISINFPLTSSCSSTVQSVNLTGTPFVFSESYNKFIGVGCNNLALMVFNASDVNTTNTIGGCLSLCNNKTLTNGAYTCNGMDCCQTAIPSDLKVFDVNLTRVLWEEDEKGCKYGFLANQTWFNSNISRLSNLESLKLVPAVLEWSIPENMLSLLTGTSNSTYCGNTSPLNSSSLGNPSSQNICFCNLGYEGNPYLSNGCQDVDECKNPALFNPVRFPGRTLVCLNTVGSYRVFIIEEPTDRTQAIGIGVGAASGVLILLFGGWGLHKGVKRRKKAKQKEQFFKRNGGLLLKQQLAEGEFNVEKTKLFDSKELEKATDRFNTNRILGQGGQGTVYKGMLADGKIVAVKKSKRVDESKIEEFVNEVVILSQINHRNIVKLMGCCLETEVPLLVYEFIPNGTLFNYLHHPNEDELPLTWDMRMRIATEIAGALFYLHSAASQPIYHRDIKSSNILLDEKYRAKIADFGTSRSVAIDQTHLTTKVQGTFGYLDPEFFQSSQFTEKSDVYSFGVVLVELLTGQAPISMKRSMEGTSLAFYFIDSMNGNTLFDILDDRVIKEGKREYIIVVANLAKRCLNLNGRARPTMKEVVVELDSVQMTQKELVVGNSQEVDEFVMTEETLGWEEDISMPTRSDLNSDTFSLLP 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8402822 8405314 + Bda031221.1 Bda09g00590 12840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00590 730 Pfam Wall-associated receptor kinase galacturonan-binding 35 93 IPR025287 GO:0030247
Bda09g00590 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Bda09g00590 730 SUPERFAMILY Protein kinase-like (PK-like) 392 679 IPR011009 -
Bda09g00590 730 PANTHER - 19 699 - -
Bda09g00590 730 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 699 IPR045274 GO:0007166
Bda09g00590 730 ProSiteProfiles Protein kinase domain profile. 408 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00590 730 Gene3D Phosphorylase Kinase; domain 1 379 483 - -
Bda09g00590 730 SMART serkin_6 408 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00590 730 CDD STKc_IRAK 414 680 - -
Bda09g00590 730 Gene3D Laminin 245 324 - -
Bda09g00590 730 Gene3D Transferase(Phosphotransferase) domain 1 484 706 - -
Bda09g00590 730 Pfam Protein kinase domain 409 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00590 730 Pfam Wall-associated kinase 166 274 IPR013695 GO:0004674|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00295 Bda-Chr7:4048249 Bda09g00590 Bda-Chr9:8402822 0 dispersed
Bda09g00590 Bda-Chr9:8402822 Bda09g00593 Bda-Chr9:8481572 0 dispersed
Bda09g00589 Bda-Chr9:8332568 Bda09g00590 Bda-Chr9:8402822 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69798 PF00069 Pkinase 1.90E-51 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00590 - - qsu:111985753 738.799