Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00595 TCCATGGAGACCGAGGAGTACAGAGAGGAAAACCTGGTTGTCAGGGAGTTTCACGCAAACGGAGTTTTCATTAAAACAACAGAAGTTGAGGCAAAGCTAGATGAGGGAAATATTCAAGAGGCCGAATCTTCCTTGCGGGAAGGATTATCATTGAATTTTGAGGAAGCAAGAGCTCTTCTTGGAAAGTTGGAGTATCAAAGAGGTAATGTGGAAGGTGCTCTTCGTGTGTTCGATGGCATTGATCTCCAAGCAGCAATTCAGAGATTGCAGCCTTCTCTTACTGAAAAAATGCCATCCAAAAAGGGCCGTCCTCGCACAGATTCGCAGCATGGAGTCTCTCAGCATGCTGCTAACCTGGTACTTGAAGCCATATATTTAAAAGCAAAGTCTCTTCAAAAGCTTGGGAAATTAACTGAGGCTGCTCATGAGTGTAAAAATGTGCTTGATGCTGTGGAGAAGATATTCTATCTTGGCATTCCCGATGTGCAAGTTGACAATAGATTGCAAGAGACAATAAGTCAAGCTGTTGAGCTTCTTCCAGAGCTTTGGAAACGGGGGGGTTGCTACCAGGAAGCAGTTTCTGCCTATCGACGAGCGCTCTTGAGCCAATGGAACCTTGATAATGATTGCTCTGCAAGGATTCAGAAAGGATTTGCTGTCTTTCTGCTTTATGGAGGGGTAGAAGCTAGCCCTCCTAGTTTAGCAGTTCAGGTTGAAGGCTCATATATACCCAAAAACAATATGGAAGAGGCAATTCTACTTCTGATGATTCTTATGAGGAAATTTTTCCTTGGTAAGATCAACTGGGATCCATCAGTAATGGAGCATCTAACATTTGCACTATCTTTATGCAGCCAAACTTCTGTTTTAGCTAAACAATTTGAAGAAATCATGCCTGGAGTATATCCCCGTGTGGATATTTGGAAGTCTTTAGCTCTGTGTTACAGTGGAGCAGGACAAAATAAATCTTCCTTAAACCTGTTGAGAAAGTCCTTACACAAACATGAAACACCAGAGGATTTGCTGGCATTGTTAGTTGCTGCAAAGATCTGCAGTGAAGATTCTTACCTTGCTGCTGAAGGAGTTGGCTATGCCCGAAGGGCAGTAAGTAATGCAGTAGGGAAAGAAGAGCATTTGAAGAGTGTGGGCCTTCGAATGTTGGGTCTTTGTTTGGGAAAGCAAGCTAAGCTATCCTCCTCTGATTTTGAGAGGTCCCGCCTTCAGTCGGAGGCTTTGAAATCTCTAGATCAGGCAGCTTCTCTGGAGCGAAATAATTCCGATTTAAGTTTTGAATTGGGAGTTCAATATGCAGAACACAGGAATTTGACTGCGGCTTTGCATTATGCGAAGAAATATATTGATAAAACCGGTGGTTCTGTCTTAAAAGGCTGGAAATTGCTTGCTCTTGTGCTGTCTTCTCAAAAAAGATTTGCAGAGGCTGAAGTAGTCACTGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAAGGACCGCTCTTCATGCTTAAAGCCAGGCTGAAGATATCTCAGTCACTACACATGGACGCTATTGAAACTTATCGATACCTCCTAGCATTAGTTCAAGCTCAAAGAAAATCGTTTGGACCACTTAAACTTCCAAATCGGGTTGAAGATGATAAGGTCAACGAATTTGAAATATGGCAAGGCTTGGCCAACTTATACGCCAGCCTTTCACATTGCAAAGATGCAGAGATATGTGTGATATGTGAAGGAAGTGGACAAATTCCAGAAGCTCTTGCTGCTTATATTAATGCTCTACTATTTGAGCCTGATTATGTTCCTTGCAAGATATTGATCAGTGCCCTTTTGACCAAAACCAGTTCAAAGTCGTTGCCAATTGTAAAATGCTTACTTTCCGATGCATTGAGGATCGATCCAACCAATAAGAAGGCTTGGTATTATTTGGGAATGATTCATAGGGACGACGGGAGAACAGCCGATGCTATCGATTGTTTTCAGGCAGCTTCGATGCTTGAAGAATCCGATCCAATCCAAAGTTTTGCCTCTATTCTCTGA 2037 42.61 SMETEEYREENLVVREFHANGVFIKTTEVEAKLDEGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSLTEKMPSKKGRPRTDSQHGVSQHAANLVLEAIYLKAKSLQKLGKLTEAAHECKNVLDAVEKIFYLGIPDVQVDNRLQETISQAVELLPELWKRGGCYQEAVSAYRRALLSQWNLDNDCSARIQKGFAVFLLYGGVEASPPSLAVQVEGSYIPKNNMEEAILLLMILMRKFFLGKINWDPSVMEHLTFALSLCSQTSVLAKQFEEIMPGVYPRVDIWKSLALCYSGAGQNKSSLNLLRKSLHKHETPEDLLALLVAAKICSEDSYLAAEGVGYARRAVSNAVGKEEHLKSVGLRMLGLCLGKQAKLSSSDFERSRLQSEALKSLDQAASLERNNSDLSFELGVQYAEHRNLTAALHYAKKYIDKTGGSVLKGWKLLALVLSSQKRFAEAEVVTDAALDETAKWEQGPLFMLKARLKISQSLHMDAIETYRYLLALVQAQRKSFGPLKLPNRVEDDKVNEFEIWQGLANLYASLSHCKDAEICVICEGSGQIPEALAAYINALLFEPDYVPCKILISALLTKTSSKSLPIVKCLLSDALRIDPTNKKAWYYLGMIHRDDGRTADAIDCFQAASMLEESDPIQSFASIL 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8496964 8501885 + Bda031226.1 Bda09g00595 12845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00595 678 MobiDBLite consensus disorder prediction 93 112 - -
Bda09g00595 678 PANTHER CALMODULIN-BINDING PROTEIN 5 677 - -
Bda09g00595 678 SMART tpr_5 305 338 IPR019734 GO:0005515
Bda09g00595 678 SMART tpr_5 121 154 IPR019734 GO:0005515
Bda09g00595 678 SMART tpr_5 461 494 IPR019734 GO:0005515
Bda09g00595 678 SMART tpr_5 636 669 IPR019734 GO:0005515
Bda09g00595 678 Gene3D Tetratricopeptide repeat domain 274 458 IPR011990 GO:0005515
Bda09g00595 678 Gene3D Tetratricopeptide repeat domain 26 204 IPR011990 GO:0005515
Bda09g00595 678 ProSiteProfiles TPR repeat profile. 636 669 IPR019734 GO:0005515
Bda09g00595 678 SUPERFAMILY TPR-like 33 481 IPR011990 GO:0005515
Bda09g00595 678 Coils Coil 404 424 - -
Bda09g00595 678 SUPERFAMILY TPR-like 121 447 IPR011990 GO:0005515
Bda09g00595 678 PANTHER PROTEIN NPG1 5 677 IPR043376 -
Bda09g00595 678 Gene3D Tetratricopeptide repeat domain 459 672 IPR011990 GO:0005515
Bda09g00595 678 SUPERFAMILY TPR-like 577 670 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00595 Bda-Chr9:8496964 Bda13g00048 Bda-Chr13:681565 0 dispersed
Bda09g00595 Bda-Chr9:8496964 Bda09g00603 Bda-Chr9:8754309 0 proximal
Bda07g00201 Bda-Chr7:2411668 Bda09g00595 Bda-Chr9:8496964 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00595 K21843 - csv:101206641 1047.34