Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00640 ATGCGAAAACTTTGCATAGCTGTTGTGCTCTGTGTTGTATTTATGAGCGTGGAAGTTGTCGGGGGTATTAAAGCCAACAGTCTTGCAATTTTGACGGATGCAGCTCATCTGCTGTCCGATGTGGCTGCCTTTGCAATTTCCCTGTTTTCCATTTGGGCATCCGGGTGGGAGGCTACTCCTCGTCAGTCTTACGGTTTCTTCCGTATCGAAATATTGGGGGCTCTTGTTTCGATCCAGATGATTTGGCTTCTTGCTGGAATTCTCGTCTATGAGGCTATTGCTCGAATCATCAATGATACGGGTGAAGTTAAGGGCTTCTTGATGTTTGTCGTTTCCGCCTTCGGCCTAGTAGTCAATATAGCCATGGCTCTGCTGCTTGGCCACTCTCATGGCCACAGTCACGGACATGGCCATGGGGAGCACCATCACGGACATGGCCATGATGATCATGACGAAAAGCATCGGCACGGGATAAGCGTCACCACCCACCACCGCCACCACCAGCAGCAGGGCGGGTCCAAGAACGACAATAAGCATCACCATTCTCACGAAGCAAATCCAACCGAGCCGCTTCTCAATAAACCGAACAGCGGGCACGATAAAACGAAAAAGCAAAAGAACATCAACGTCCAAGGTGCGTATCTACATGTGCTCGGAGACTCCATACAGAGCGTGGGAGTGATGATCGGAGGGGCAATCATATGGTTCAAGCCCGAGTGGAAGATCATCGATCTTATTTGCACACTCATCTTTTCCGCGATTGTTTTGGGCACGACGATTCGGATGCTAAGGAACATTCTGGAGGTTCTTATGGAGAGCACGCCTAGAGAAATAGATGCTACGAAGCTCGAAAAGGGCTTGTGTGAGATGGACGAGGTGGTTGCCATCCACGAGCTGCATATTTGGGCGATTACTGTCGGGAAAGTACTTCTCGCTTGTCATGTGATAATCAAGCCGGAAGCGGATGCGGATTTGGTGTTGGACAATGTGATAGAGTATATAAAAAGGGAATACAACATCAGCCATGTTACCATCCAGATAGAGCGCCAGTAG 1053 49.19 MRKLCIAVVLCVVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIARIINDTGEVKGFLMFVVSAFGLVVNIAMALLLGHSHGHSHGHGHGEHHHGHGHDDHDEKHRHGISVTTHHRHHQQQGGSKNDNKHHHSHEANPTEPLLNKPNSGHDKTKKQKNINVQGAYLHVLGDSIQSVGVMIGGAIIWFKPEWKIIDLICTLIFSAIVLGTTIRMLRNILEVLMESTPREIDATKLEKGLCEMDEVVAIHELHIWAITVGKVLLACHVIIKPEADADLVLDNVIEYIKREYNISHVTIQIERQ 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9505696 9506748 - Bda031274.1 Bda09g00640 12890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00640 350 MobiDBLite consensus disorder prediction 142 158 - -
Bda09g00640 350 MobiDBLite consensus disorder prediction 131 203 - -
Bda09g00640 350 MobiDBLite consensus disorder prediction 169 187 - -
Bda09g00640 350 Pfam Cation efflux family 5 271 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bda09g00640 350 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 277 348 IPR036837 -
Bda09g00640 350 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 349 - -
Bda09g00640 350 PANTHER METAL TOLERANCE PROTEIN A1 1 349 - -
Bda09g00640 350 TIGRFAM CDF: cation diffusion facilitator family transporter 2 350 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bda09g00640 350 SUPERFAMILY Cation efflux protein transmembrane domain-like 2 272 IPR027469 -
Bda09g00640 350 Gene3D Cation efflux protein transmembrane domain 1 270 IPR027469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01254 Bda-Chr1:47994302 Bda09g00640 Bda-Chr9:9505696 3.29E-29 dispersed
Bda07g00160 Bda-Chr7:1977281 Bda09g00640 Bda-Chr9:9505696 0 dispersed
Bda07g00567 Bda-Chr7:7027479 Bda09g00640 Bda-Chr9:9505696 1.92E-16 dispersed
Bda09g00640 Bda-Chr9:9505696 Bda09g00629 Bda-Chr9:9255927 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00640 K14689 - qsu:112039309 547.74