Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00653 ATGTTTTCATGCGTCGCATGCACGAAGCGACTGGGAGAGACAGAGGGAGAAGATGGAAGAGTGGGAAGCAGCAGCACACCAAGTACAAAAGAAGCCGTCAAAAGCCTGACGGCGCAGATTAAGGATGTGGCAATAAAATTCTCCGGTGCCAATAGGCAACGCCGGCCATATGCTGGCTCGGGGCTGTACAAGAAAGGACACATGCCTTACTCGAGCTTTGACGTGGCCGACTCAAACAAAATTCCATTTCCCTACAACGGAGGTGGAAGCTCGACTTCAACGCCGACGGTGAATTTTACAACATCGAATGCAAAAACTTCTCAAGTTTTGAGCACTCAATCCGACGGTAATGTAGACTCTATCTCTACTCGATCGTGTAATGTGGTGTTAGAAAATGACGACGAGTCAAAGGAGTGGATGGCACAGGTCGAGCCTGGGGTTCATATTACTTTTATGTCACTCCCTAATGGTGGAAATGATCTAAGACGAATTCGATTCAGCCGAGAAATGTTCAACAAATGGCAAGCTCAGCAATGGTGGGGCAAAAACTACGACCGGATCTTGGAGCTTTACAACGTCCAGAGATTCAATCGGCAGGCTCTTCACACTCCGATGAGGTCGGAGGAAACGGTAAGCCAGTTCGAGCTTTACCCATTTCTAAGTTCCAATTCTTCACCGAAAAATGCTCGATCTTTTTGCTCAAAGATGGGATCGACCATGGGAAATGGTTCAAAGGGTGAGCCACCATCTCTTGATGAATCTCGAATGACAACCTCATCACAGGACGACGCATCCGTCTCTATAAGCAATGCAAGTGAAATCGAGTCCGAATGGGTCGAGGAGGATGAACCTGGTGTGTATATAACTGTCAGACAGCTAGCGGACGGGACAAGAGAGCTCCGTCGAGTCAGATTCAGCCGGGAGAAGTTTGGAGAGGTAAGAGCGAAGCAATGGTGGGAAGAGAATAGAGAGAGAGTACAAGCTGAGTACCTATGA 996 48.09 MFSCVACTKRLGETEGEDGRVGSSSTPSTKEAVKSLTAQIKDVAIKFSGANRQRRPYAGSGLYKKGHMPYSSFDVADSNKIPFPYNGGGSSTSTPTVNFTTSNAKTSQVLSTQSDGNVDSISTRSCNVVLENDDESKEWMAQVEPGVHITFMSLPNGGNDLRRIRFSREMFNKWQAQQWWGKNYDRILELYNVQRFNRQALHTPMRSEETVSQFELYPFLSSNSSPKNARSFCSKMGSTMGNGSKGEPPSLDESRMTTSSQDDASVSISNASEIESEWVEEDEPGVYITVRQLADGTRELRRVRFSREKFGEVRAKQWWEENRERVQAEYL 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9797709 9800144 + Bda031298.1 Bda09g00653 12903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00653 331 MobiDBLite consensus disorder prediction 224 274 - -
Bda09g00653 331 ProSiteProfiles BRX domain profile. 276 331 IPR013591 -
Bda09g00653 331 Pfam Transcription factor BRX N-terminal domain 23 53 IPR027988 -
Bda09g00653 331 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Bda09g00653 331 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 331 IPR044532 -
Bda09g00653 331 MobiDBLite consensus disorder prediction 224 277 - -
Bda09g00653 331 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 331 - -
Bda09g00653 331 Pfam Transcription factor regulating root and shoot growth via Pin3 275 330 IPR013591 -
Bda09g00653 331 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01229 Bda-Chr6:42357103 Bda09g00653 Bda-Chr9:9797709 1.02E-140 dispersed
Bda07g00145 Bda-Chr7:1774808 Bda09g00653 Bda-Chr9:9797709 1.05E-08 dispersed
Bda08g00650 Bda-Chr8:6759120 Bda09g00653 Bda-Chr9:9797709 2.99E-131 dispersed
Bda09g00653 Bda-Chr9:9797709 Bda10g00868 Bda-Chr10:43172970 1.14E-95 dispersed
Bda07g00143 Bda-Chr7:1759668 Bda09g00653 Bda-Chr9:9797709 1.39E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00653 - - pop:18094075 404.831