Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00661 ATGGACGCTGGTGATAAAGGCCAAGTTGTGGACGTGAGGTCAGTCGTCGAAGCAGTCGCTGCCGGTGGCGATTGCGATGTTCCGGTCTACGTGGTCGAAAGCCTTTGCATGCGCTGTAGAGAAAACGGGATAACAAGGTTTCTTTTAACTATAATTCCACACTTCAGAAAGATATTGTTGTCGGCCTTTGAATGTACACATTGTGGTGAGAGGAATAATGAGGTTCAATTTGCTGGAGAGATTCAACCACGTGGATGCTGCTACATTTTGGAGGTCTCCGGGGGCGATTTGAAGATGCTTAATCGACAAGTAGTGAAATCTGAGTCTGCTACAATTAGGATTCCTGATTTGGATTTCGAGATTCCTACTGAGGCTCAACGAGGAACTCTTTCTACGGTGGAAGGGATACTAGCTAGAGCAATGGATGAATTGCAGGCTCTTCAAGAAGAGCGTAGGAGATTGGATCCTCAAACCGCTGAAGGAATTGATCAGTTTTTGTTGAAATTAAAAGCTTGTGCGATGGGAGATACATCATTCACTTTCATCTTAGATGATCCGGCTGGAAACAGCTTCATTGAGAATCCATATGCTCCATCGTCGGACCTATCATTGAGTGTTAAGTTCTATGAGCGAACTCCAGAGCAACAAGCTTCATTGGGATATCTCGTTGACTCATTTGAATCAGGAGAAGGTGCTAATGGAGCATTATCAGATGAAAGGGCTGGTGTTTCAGAAATCGGAACAGTGCCAACTTCATCAGTTGGAGCACCAGCTGGCCATCGAGCAATTGCTCAGAGTAATAGCGCAGAGATTGCTGAAGCTTTATTCCGTTACACTGCTCCTGAAGAAGTGATGACTTTTCCATCAACATGTGGGGCTTGTGCTACCAGCTGCGAGACTCGAATGTTTGTTACAAAAATACCTTACTTTCAAGAAGTGATTGTCATGGCTTCCACCTGTGACTTATGTGGTTACCGTAATTCTGAGGTGAAGCCTGGTGGTCGAATTCCAGAAAAAGGAAAAGTAATTACTCTCCAAGTAAAGAGCTCTAAGGATCTTAGTCGTGATGTTATAAAGTCAGATACTGCTAGTGTAAGGGTTCCGGATCTGGACTTGGAGCTGGCCAGTGGCACTCTTGGAGGAGTTGTTACAACGGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGAGTGCATGGATTTACCTTTGGAGACAGTCTTGATGATGATAAAAAGAGCAAGTGGCAAGATTTTGGAAAGAGGTTAAACAAGCTTCTGACTTTGGAAGAGCCTTGGACTTTGATTTTGGACGATGCATTGGCAAATTCATTTGTTGCTCCAGCTACTGACAATATCAAAGACGACCTTCAGTTAACGTTCGAGGAGTATCAGAGGTCGTGGGAGCAGAACGAAGAGCTGGGTCTGAACGATATGAACACGGGAGCAGCGGACGTTGCTTATGATTCGGGTGAGTAG 1482 44.47 MDAGDKGQVVDVRSVVEAVAAGGDCDVPVYVVESLCMRCRENGITRFLLTIIPHFRKILLSAFECTHCGERNNEVQFAGEIQPRGCCYILEVSGGDLKMLNRQVVKSESATIRIPDLDFEIPTEAQRGTLSTVEGILARAMDELQALQEERRRLDPQTAEGIDQFLLKLKACAMGDTSFTFILDDPAGNSFIENPYAPSSDLSLSVKFYERTPEQQASLGYLVDSFESGEGANGALSDERAGVSEIGTVPTSSVGAPAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACATSCETRMFVTKIPYFQEVIVMASTCDLCGYRNSEVKPGGRIPEKGKVITLQVKSSKDLSRDVIKSDTASVRVPDLDLELASGTLGGVVTTVEGLITKISESLERVHGFTFGDSLDDDKKSKWQDFGKRLNKLLTLEEPWTLILDDALANSFVAPATDNIKDDLQLTFEEYQRSWEQNEELGLNDMNTGAADVAYDSGE 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10038291 10046137 - Bda034116 Bda09g00661 12911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00661 493 PANTHER ZINC FINGER PROTEIN ZPR1 4 491 IPR040141 -
Bda09g00661 493 SMART zpr1 289 449 IPR004457 GO:0008270
Bda09g00661 493 SMART zpr1 34 194 IPR004457 GO:0008270
Bda09g00661 493 Gene3D ZPR1, A/B domain 335 477 IPR042451 -
Bda09g00661 493 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Bda09g00661 493 Coils Coil 130 157 - -
Bda09g00661 493 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 4 491 - -
Bda09g00661 493 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Bda09g00661 493 Pfam ZPR1 zinc-finger domain 289 447 IPR004457 GO:0008270
Bda09g00661 493 Gene3D ZPR1, zinc finger domain 279 334 IPR042452 -
Bda09g00661 493 Gene3D ZPR1, zinc finger domain 24 79 IPR042452 -
Bda09g00661 493 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
Bda09g00661 493 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 290 481 IPR004457 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00661 Bda-Chr9:10038291 Bda09g00681 Bda-Chr9:10647991 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00661 K06874 - csv:101208000 754.592