Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00681 ATGGACGCTGGTGATAAAGGCCAAGTTGTGGACGTGAGGTCAGTCGTCGAAGCAGTCACTGCCGGTGGCGATTGTGATGTTCCGGTCTACGTGGTCGAAAGCCTTTGCATGCGCTGTAGAGAAAACGGGATAACAAGGTTTCTTTTAACTATAATTCCACACTTCAGAAAGATATTGTTGTCGGCCTTTGAATGTACACATTGTGGTGAGAGGAATAATGAGGTTCAATTTGCTGGAGAGATTCAACCACGTGGGTGCTGCTACATTTTGGAGGTCTCCGCGGGCGATTTGAAGATGCTAAATCGACAAGTAGTGAAATCTGAGTCTGCTACAATTAGGATTCCTGATTTGGATTTCGAGATTCCTACTGAGGCTCAACGAGGAACTCTTTCTACGGTGGAAGGGATACTAGCTAGAGCAATGGATGAATTGCAGGCTCTTCAAGAAGAGCGTAGGAGATTGGATCCTCAAACCGCTGAAGGAATTGATCAGTTTTTGTTGAAATTAAAAGCTTGTGCGATGGGAGATACATCATTCACTTTCAACTTAGATGATCCGGCTGGAAACAGCTTCATTGAGAATCCATATGCTCCATCGTCGGACCCATCATTGAGTGTTAAGTTCTATGAGCGAACTCCAGAGCAACAAGCTTCATTGGGATATCTCGTTGGCTCATTTGAATCAGGAGAAGATGCTAATGGAGCATTATCAGATGAAAGGGCTGGTGTTTCAGAAATCGGAACAGTGCCAACTTCATCAGTTGGAGCACCAGCTGGCCATCGAGCAATTGCTCAGAGTAATAGCGCAGAGATTGCTGAAGCTTTATTCCGTTACACTGCTCCTGAAGAAGTGATGACTTTTCCATCAACATGTGGGGCTTGTGCTACCAGCTGCGAGACTCGAATGTTTGTTACAAAAATACCTTACTTTCAAGAAGTGATTGTCATGGCATCCACCTGTGATTTATGTGGTTACCGTAATTCTGAGGTGAAGCCTGGTGGTCGAATTCCAGAAAAAGGAAAAGTAATTACTCTCCAAGTAAAGAGCTCTAAGGATCTTAGTCGTGATGTTATAAAGTCAGATACTGCTAGTGTAAGAGTTCCGGATCTGGACTTGGAGCTGGCTAGTGGCACTCTTGGAGGAGTTGTTACAACGGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGAGTGCATGGATTTACCTTTGGAGACAGTCTTGATGATGATAAAAAGAGCAAGTGGCAAGATTTTGGAAAGAGGTTAAACAAGCTTCTGACTTTGGAAGAGCCTTGGACTTTGATTTTGGACGATGCATTGGCAAATTCATTTGTTGCTCCAGCGACTGACAATATCAAAGACGACCTTCAGTTAACGTTTGAGGAGTATCAGAGGTCATGGGAGCAGAACGAAGAGCTGGGTCTGAACGATATGAACACGGGAGCAGCGGACGTTGCTTATGAT 1470 44.08 MDAGDKGQVVDVRSVVEAVTAGGDCDVPVYVVESLCMRCRENGITRFLLTIIPHFRKILLSAFECTHCGERNNEVQFAGEIQPRGCCYILEVSAGDLKMLNRQVVKSESATIRIPDLDFEIPTEAQRGTLSTVEGILARAMDELQALQEERRRLDPQTAEGIDQFLLKLKACAMGDTSFTFNLDDPAGNSFIENPYAPSSDPSLSVKFYERTPEQQASLGYLVGSFESGEDANGALSDERAGVSEIGTVPTSSVGAPAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACATSCETRMFVTKIPYFQEVIVMASTCDLCGYRNSEVKPGGRIPEKGKVITLQVKSSKDLSRDVIKSDTASVRVPDLDLELASGTLGGVVTTVEGLITKISESLERVHGFTFGDSLDDDKKSKWQDFGKRLNKLLTLEEPWTLILDDALANSFVAPATDNIKDDLQLTFEEYQRSWEQNEELGLNDMNTGAADVAYD 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10647991 10663071 - Bda034122 Bda09g00681 12931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00681 490 PANTHER ZINC FINGER PROTEIN ZPR1 4 490 IPR040141 -
Bda09g00681 490 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Bda09g00681 490 Gene3D ZPR1, A/B domain 335 477 IPR042451 -
Bda09g00681 490 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Bda09g00681 490 Pfam ZPR1 zinc-finger domain 289 447 IPR004457 GO:0008270
Bda09g00681 490 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 4 490 - -
Bda09g00681 490 SMART zpr1 289 449 IPR004457 GO:0008270
Bda09g00681 490 SMART zpr1 34 194 IPR004457 GO:0008270
Bda09g00681 490 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 36 217 IPR004457 GO:0008270
Bda09g00681 490 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 290 481 IPR004457 GO:0008270
Bda09g00681 490 Coils Coil 130 157 - -
Bda09g00681 490 Gene3D ZPR1, zinc finger domain 279 334 IPR042452 -
Bda09g00681 490 Gene3D ZPR1, zinc finger domain 24 79 IPR042452 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00661 Bda-Chr9:10038291 Bda09g00681 Bda-Chr9:10647991 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00681 K06874 - pop:7468335 759.214