Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00709 ATGGCTGGTTTGGATTTGGGAAATCGCTATGTTCATCCGCTGCACTTACCAGACTTGCACCTACAAAGACTACCTCAATCTCACCCACCATCAAATTCCGAGGAAGATCTCAATCGAGGCACTCATTTTTCAGGTGAAGATGGATCTCACCAAGCCATAGACAGCGCCGGAGATGTGGTCGGTCGCAGACCTCGTGGGCGACCACCTGGCTCCAAAAACAAGCCTAAACCGCCGGTTATAATTACACGGGAGAGTGCCAACACTCTCCGAGCTCATATTCTCGAGGTTGGCAATGGCACTGATGTGTTCGACTGTGTCGCTACCTACGCTCGCCGTAGGCAGCGGGGGATCTGCATCTTGAGCGGGAGTGGGATGGTGACAAACGTCAGCCTGAGACAACCGACGGCTGCTGGTGCCGTCGTAACCCTACATGGGACGTTTGAGATACTATCGCTTTCAGGTTCCTTTCTGCCGCCGCCAGCTCCTCCGGGAGCCACGAGTCTGACTATATTTTTGGCTGGCGGTCAAGGGCAAGTGGTTGGAGGAAGTGTCGTGGGGGAGTTGATTGCGGCTGGGCCTATAATCCTCATCGCTTCATCGTTTACTAACGTGGCCTACGAGAGACTGCCGTTGGATGAGGAGGAGAATCTTCCTGTTCAGGAGTCTGATTCTCCGGCAGCCGGAGCTGGAAGTGGTATTGGCGTAGGGAATAACCCATTTCCGGATCCTTCTTCTGGACTTCCTTTCCTCAATCTGCCACTTAATTTTCCGAACGTTCAGCTTCCCGGCGATGGGTGGGCAACTAATTCATCAGCTCGTCCATTTTGA 828 53.26 MAGLDLGNRYVHPLHLPDLHLQRLPQSHPPSNSEEDLNRGTHFSGEDGSHQAIDSAGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGTDVFDCVATYARRRQRGICILSGSGMVTNVSLRQPTAAGAVVTLHGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELIAAGPIILIASSFTNVAYERLPLDEEENLPVQESDSPAAGAGSGIGVGNNPFPDPSSGLPFLNLPLNFPNVQLPGDGWATNSSARPF 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11462237 11463064 + Bda031380.1 Bda09g00709 12959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00709 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 274 IPR014476 GO:0003680
Bda09g00709 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 203 IPR005175 -
Bda09g00709 275 ProSiteProfiles PPC domain profile profile. 86 223 IPR005175 -
Bda09g00709 275 Gene3D - 89 223 - -
Bda09g00709 275 MobiDBLite consensus disorder prediction 21 80 - -
Bda09g00709 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 274 - -
Bda09g00709 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 218 - -
Bda09g00709 275 CDD DUF296 90 173 IPR005175 -
Bda09g00709 275 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00709 Bda-Chr9:11462237 Bda11g00297 Bda-Chr11:3364528 2.12E-109 dispersed
Bda07g00104 Bda-Chr7:1276687 Bda09g00709 Bda-Chr9:11462237 1.38E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00709 - - jre:108994023 361.303