Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00724 ATGACGGACTATCGATTAGCGACGACGGCTATGAATCTTTGGAGTGACGAGAATGCTTCGGTCATGGATGCTTTCCTGAATTCTGATATTTCTTCTTTCTGGGTTCCGCCTCCTCAAAACCACCCTTCCTCCGCCTCCACCTCTGCTCCCCTCCCGCAGCCGTCAGCTGCGGTTTTCAACCAGGAAAGTTTGCAGCAGCGTCTGCAGGCGCTGATCGAGGGACCTCGCCATATCTGGACTTATGCAATCTTCTGGCAGGCCTCTTACGATTACTCCGGCCCATCGGTGTTAGGATGGGGCGATGGGTATTACAGAGGGGAGAAAGATAGAGGCACGGCCAAAAGCATTTCAGCTTCTTCTGCGGCAGAGCAGGAGCACCGGAAAAAGGTTCTCCGCGATCTCAACTCACTGATTTCAGGATCCGCCGTCCCTTCAGACGACGCCGTCGATGAAGTTGTCACCGACACCGAGTGGTTCTTCTTGGTTTCGATGACCCAGTCTTTTGTCGACGGCAGTGGGTTGCCCGGTCAGGCCTTGCTCAATTCCCGGCCGGTGTGGATTTCTGGGTCGGACCGACTCGCGTCATCCACCTGCGAACGCGCTCGGCAAGGTCAGACCTTCGGGTTACAGACGATGATATGTATACCCTCTGCTAATGGAGTAGTTGAATTAGGGTCGACGGAGGTCGTCTTACAGAGCTCCGATCCGATGAATAAAGTTAGGGTTTTGTTCGATTTCAATAATCTGGAGGTTGGTTCATGGCCCATGGCCGGAGCTGACCATGCCGAAACAGACCCATCTGCACTCTGGCTAACAGACCCTTCTGAAATCAAAGAACCAGCGAGCTCTATTCCACCTTCAATGGCCCCTTCTTCAACTTCCCATCCAGCTTCTAAGCCAATCCACTTCGATAATCCAACGCCGACGAGTTTATCGGACATTCCAGCCAATCAGCAGTCAACACAGATGCAGACGCAAACCTTCTTCTCCAGAGAACTGAATTTCTCCAACTACGGATGCGAAGTAACCAGCGCAAAGAACGGAAATTCCCATACGATGAAGCCAGAATCGGGGGAGATTCTCAACTTCGGAGAGAGTAAAAAAAGTTCTTACGGGAACGGCAGCTTGTTTTCCGGCCATTCTCAGGTGGTAACCGAGGAGCCCGTAAACAAGAAGAGGTCGCCGGCTTCCCGAGGAAGTAACGAAGATGGGATGATGTCTTTTACTTCCGGCGTGATTCTGCCGTCTTCCGGTGGAGCTAAGTCAAGCGGCGGTGGAGTGGATTCCGACCATTCCGATCTCGAAGCTTCAGTAGTTCGTGAGGCAGACAGTAGCAGAGTGGTGGAACCGGAGAAGAAGCCTCGGAAAAGAGGAAGAAAACCAGCAAACGGAAGAGAAGAGCCATTAAATCACGTTGAAGCGGAGAGACAGAGAAGAGAGAAGCTAAACCAGAGATTCTACGCTCTCAGAGCTGTAGTTCCAAACGTGTCGAAAATGGACAAAGCATCCCTTCTCGGCGACGCCATCTCCTACATCAACGAGCTCAAATCCAAGCTCCAAACTACAGAATCAGATAATGAAGAGTTGCAGACACAACTAGATTCAGTGAAAAAGGAGTTGGACCACAAAGACAGTCGTCATTCAGGATCAAAACAATCTCCGCCTAATCAAGATCTGAATGTCTCAAATCAAAACGGAGGTAAACTCACAGAAATGGACATCGATGTTAAAATAATCGGCTGGGATGCTATGATCCGAATCCAATGCAGCAAGGAAAACCACCCAGCAGCTACAATAATGGCGGCACTGAAGGAAATAGATTTGGAAGTTCACCACGCCAGCATGTCAGTGGTGAATAACCTGATGATCCAACAAGCTACAGTGAAGATGGGGAGTAGATTTTACACTCAAGAACAGCTCAAGATCGCTCTGTCAACAAAATTAGGCAACACCCGATGA 1959 50.08 MTDYRLATTAMNLWSDENASVMDAFLNSDISSFWVPPPQNHPSSASTSAPLPQPSAAVFNQESLQQRLQALIEGPRHIWTYAIFWQASYDYSGPSVLGWGDGYYRGEKDRGTAKSISASSAAEQEHRKKVLRDLNSLISGSAVPSDDAVDEVVTDTEWFFLVSMTQSFVDGSGLPGQALLNSRPVWISGSDRLASSTCERARQGQTFGLQTMICIPSANGVVELGSTEVVLQSSDPMNKVRVLFDFNNLEVGSWPMAGADHAETDPSALWLTDPSEIKEPASSIPPSMAPSSTSHPASKPIHFDNPTPTSLSDIPANQQSTQMQTQTFFSRELNFSNYGCEVTSAKNGNSHTMKPESGEILNFGESKKSSYGNGSLFSGHSQVVTEEPVNKKRSPASRGSNEDGMMSFTSGVILPSSGGAKSSGGGVDSDHSDLEASVVREADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQTTESDNEELQTQLDSVKKELDHKDSRHSGSKQSPPNQDLNVSNQNGGKLTEMDIDVKIIGWDAMIRIQCSKENHPAATIMAALKEIDLEVHHASMSVVNNLMIQQATVKMGSRFYTQEQLKIALSTKLGNTR 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12230570 12232528 - Bda031405.1 Bda09g00724 12974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00724 652 MobiDBLite consensus disorder prediction 277 315 - -
Bda09g00724 652 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 64 244 IPR025610 -
Bda09g00724 652 MobiDBLite consensus disorder prediction 400 417 - -
Bda09g00724 652 MobiDBLite consensus disorder prediction 285 315 - -
Bda09g00724 652 PANTHER TRANSCRIPTION FACTOR MYC2 39 648 - -
Bda09g00724 652 MobiDBLite consensus disorder prediction 372 476 - -
Bda09g00724 652 Pfam Helix-loop-helix DNA-binding domain 470 515 IPR011598 GO:0046983
Bda09g00724 652 CDD bHLH_AtAIB_like 463 539 - -
Bda09g00724 652 MobiDBLite consensus disorder prediction 433 476 - -
Bda09g00724 652 Coils Coil 512 546 - -
Bda09g00724 652 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 466 515 IPR011598 GO:0046983
Bda09g00724 652 MobiDBLite consensus disorder prediction 537 566 - -
Bda09g00724 652 Gene3D - 458 545 IPR036638 GO:0046983
Bda09g00724 652 PANTHER MYC 39 648 IPR045084 GO:0003700|GO:0006355
Bda09g00724 652 SMART finulus 472 521 IPR011598 GO:0046983
Bda09g00724 652 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 469 536 IPR036638 GO:0046983
Bda09g00724 652 MobiDBLite consensus disorder prediction 550 566 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00099 Bda09g00724 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00086 Bda-Chr8:786604 Bda09g00724 Bda-Chr9:12230570 4.28E-17 dispersed
Bda08g00100 Bda-Chr8:884850 Bda09g00724 Bda-Chr9:12230570 6.65E-33 dispersed
Bda09g00724 Bda-Chr9:12230570 Bda11g00209 Bda-Chr11:2624274 1.05E-79 dispersed
Bda07g00099 Bda-Chr7:1167675 Bda09g00724 Bda-Chr9:12230570 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16394 PF14215 bHLH-MYC_N 2.20E-53 CL0161 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00724 K13422 - vvi:100250607 870.922