Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00741 ATGTATGGACAGAGCTACGGGACCGAATCAGATTTCGGTTTGTTTGAAGCTGTTCGCCGGCATTTAATCGACGAGCCAGAGGCTCGCCGAGGCTGTGAATTGGGGGTTACCCCGGTTTTCTGCCGGAGCTCCAGTTTTGGAAGCGTGTACCCGTGTTTGACTGAGAGTTGGGGCATGTTGCCGTTGAAGGAAAACGATTCGGAGGATATGGTGCTCGCCGGAGTACTCCGAGATGCTGTCAGTTTCGGGTGGGTTCCGTCGCTCAATTCTGCATCAATGGCGAGTGGCGTTTTTGAAACTTCGCTGGTAAAACCCGACGCGGAATTGGAGAGTCTTTCGCTGGTTTTTGGGGAAGATCGGTCGCCAGCGCCGCCTGCTGCTCCGTCCAAGGGGAAGCACTACAGAGGAGTTCGCCAACGTCCTTGGGGAAAATTCGCGGCGGAGATTCGTGATCCGGCGAAAAACGGCGCCAGAGTCTGGCTCGGGACGTTCGAGACGGCGGAGGATGCGGCCCTGGCGTATGACAGAGCCGCCTACAAGATGCGCGGCTCGAAAGCGCTTCTGAACTTTCCGCTTCGAGTCAATTCAGGGGAGCCCGACCCGGTCAGAGTGACCTCAAAACGATCCTCATCGGGCCGATCCCCTTCATCGCCAAAAGGGTCGCCGAAACGCCGGAAGACGACAGACAACACAGCAGCTCAGCCAATTTTGGCGACTCTACCGCCGTTAGAAGAAGGAAAAGAAATGGAGGTGGCATTACGAACCAGTCCTGTTGAGTCCTCGTCGCTCGTCTAA 795 56.35 MYGQSYGTESDFGLFEAVRRHLIDEPEARRGCELGVTPVFCRSSSFGSVYPCLTESWGMLPLKENDSEDMVLAGVLRDAVSFGWVPSLNSASMASGVFETSLVKPDAELESLSLVFGEDRSPAPPAAPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYKMRGSKALLNFPLRVNSGEPDPVRVTSKRSSSGRSPSSPKGSPKRRKTTDNTAAQPILATLPPLEEGKEMEVALRTSPVESSSLV 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12928612 12929406 + Bda031442.1 Bda09g00741 12991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00741 264 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Bda09g00741 264 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Bda09g00741 264 SUPERFAMILY DNA-binding domain 133 193 IPR016177 GO:0003677
Bda09g00741 264 CDD AP2 132 191 IPR001471 GO:0003700|GO:0006355
Bda09g00741 264 ProSiteProfiles AP2/ERF domain profile. 133 191 IPR001471 GO:0003700|GO:0006355
Bda09g00741 264 PANTHER DNA-BINDING DOMAIN 24 229 IPR044808 GO:0003700|GO:0009873
Bda09g00741 264 Gene3D AP2/ERF domain 132 194 IPR036955 GO:0003700|GO:0006355
Bda09g00741 264 MobiDBLite consensus disorder prediction 202 218 - -
Bda09g00741 264 Pfam AP2 domain 133 183 IPR001471 GO:0003700|GO:0006355
Bda09g00741 264 SMART rav1_2 133 197 IPR001471 GO:0003700|GO:0006355
Bda09g00741 264 MobiDBLite consensus disorder prediction 194 264 - -
Bda09g00741 264 PANTHER BNAANNG21280D PROTEIN 24 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00598 Bda-Chr8:6108808 Bda09g00741 Bda-Chr9:12928612 5.47E-91 dispersed
Bda09g00741 Bda-Chr9:12928612 Bda15g00767 Bda-Chr15:11486761 7.07E-32 dispersed
Bda13g00069 Bda-Chr13:938904 Bda09g00741 Bda-Chr9:12928612 6.41E-31 dispersed
Bda09g00741 Bda-Chr9:12928612 Bda06g00011 Bda-Chr6:97555 1.39E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16397 PF00847 AP2 6.10E-15 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00741 K09286 - csv:101203663 278.485