Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00805 | ATGGAAGTGGTATGTGAAAGCAGTAAAGATGAAGCAGGAATCAAGCTGTTTGGGAAGACTATTATATTCCGAAGTATAAAAGAAAACGAAGAGGAAATGAAAGCGGATCGGAAGACGGAGGAGAAGAGGCCGGAAAAGATAATACCATGTCCGAGATGCAAGAGTATGGAGACCAAGTTTTGCTACTTCAACAACTACAACGTTAACCAACCCAGACATTTTTGCAAAGCTTGTCAGAGGTACTGGACCGCCGGAGGCGCCCTCCGCAACGTCCCAGTCGGCGCCGGACGCCGGAAGAACAAGCCAGCTTGTGGAGGCCTCAACCAATTTCCAGAGAGTTATCTGTATGGGGTGCCAGACTGGCCTTTTACCACGGGAGATGAAGATTTCCGGCGAGACTTTCTAATGAAGCGTCGTCGGGCGAGTCAAAGGCATTATTATTGA | 444 | 48.42 | MEVVCESSKDEAGIKLFGKTIIFRSIKENEEEMKADRKTEEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKACQRYWTAGGALRNVPVGAGRRKNKPACGGLNQFPESYLYGVPDWPFTTGDEDFRRDFLMKRRRASQRHYY | 147 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 15566524 | 15566967 | - | Bda031549.1 | Bda09g00805 | 13055 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00805 | 147 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 5 | 117 | - | - | |
Bda09g00805 | 147 | ProSitePatterns | Zinc finger Dof-type signature. | 50 | 86 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00805 | 147 | ProSiteProfiles | Zinc finger Dof-type profile. | 48 | 102 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00805 | 147 | Pfam | Dof domain, zinc finger | 46 | 101 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00805 | 147 | PANTHER | CYCLIC DOF FACTOR 2 | 5 | 117 | IPR045174 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00030 | Bda-Chr2:1393842 | Bda09g00805 | Bda-Chr9:15566524 | 2.92E-70 | dispersed | |
Bda07g01470 | Bda-Chr7:27415974 | Bda09g00805 | Bda-Chr9:15566524 | 6.28E-33 | dispersed | |
Bda09g00805 | Bda-Chr9:15566524 | Bda10g01065 | Bda-Chr10:44669598 | 2.84E-37 | dispersed | |
Bda09g00803 | Bda-Chr9:15524111 | Bda09g00805 | Bda-Chr9:15566524 | 4.74E-85 | proximal | |
Bda09g00805 | Bda-Chr9:15566524 | Bda09g00808 | Bda-Chr9:15672814 | 1.57E-107 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16402 | PF02701 | zf-Dof | 1.40E-32 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00805 | - | - | mnt:21389240 | 175.637 |