Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00805 ATGGAAGTGGTATGTGAAAGCAGTAAAGATGAAGCAGGAATCAAGCTGTTTGGGAAGACTATTATATTCCGAAGTATAAAAGAAAACGAAGAGGAAATGAAAGCGGATCGGAAGACGGAGGAGAAGAGGCCGGAAAAGATAATACCATGTCCGAGATGCAAGAGTATGGAGACCAAGTTTTGCTACTTCAACAACTACAACGTTAACCAACCCAGACATTTTTGCAAAGCTTGTCAGAGGTACTGGACCGCCGGAGGCGCCCTCCGCAACGTCCCAGTCGGCGCCGGACGCCGGAAGAACAAGCCAGCTTGTGGAGGCCTCAACCAATTTCCAGAGAGTTATCTGTATGGGGTGCCAGACTGGCCTTTTACCACGGGAGATGAAGATTTCCGGCGAGACTTTCTAATGAAGCGTCGTCGGGCGAGTCAAAGGCATTATTATTGA 444 48.42 MEVVCESSKDEAGIKLFGKTIIFRSIKENEEEMKADRKTEEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKACQRYWTAGGALRNVPVGAGRRKNKPACGGLNQFPESYLYGVPDWPFTTGDEDFRRDFLMKRRRASQRHYY 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15566524 15566967 - Bda031549.1 Bda09g00805 13055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00805 147 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 5 117 - -
Bda09g00805 147 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Bda09g00805 147 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
Bda09g00805 147 Pfam Dof domain, zinc finger 46 101 IPR003851 GO:0003677|GO:0006355
Bda09g00805 147 PANTHER CYCLIC DOF FACTOR 2 5 117 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00030 Bda-Chr2:1393842 Bda09g00805 Bda-Chr9:15566524 2.92E-70 dispersed
Bda07g01470 Bda-Chr7:27415974 Bda09g00805 Bda-Chr9:15566524 6.28E-33 dispersed
Bda09g00805 Bda-Chr9:15566524 Bda10g01065 Bda-Chr10:44669598 2.84E-37 dispersed
Bda09g00803 Bda-Chr9:15524111 Bda09g00805 Bda-Chr9:15566524 4.74E-85 proximal
Bda09g00805 Bda-Chr9:15566524 Bda09g00808 Bda-Chr9:15672814 1.57E-107 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16402 PF02701 zf-Dof 1.40E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00805 - - mnt:21389240 175.637