Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00808 | ATGGAAGTGGTATGTGAAAGCAGTAAAGATGAAGCAGGAATCAAGCTGTTTGGGAAGACTATTATATTCCGAAGTATAAAAGAAAACGAAGAGGAAATGAAAGCTGATCGGAAGACGGAGGAGAAGAGGCCGGAAAAGATAATACCATGTCCGAGATGCAAGAGTATGGAGACCAAGTTTTGTTACTTCAACAACTACAACGTTAACCAACCCAGACATTTTTGCAAAGGTTGTCAGAGGTACTGGACCGCCGGAGGCGCCCTCCGCAACGTCCCAGTCGGCGCCGGACGCCGGAAGAACAAGCCAGTTTGTGGAGGCCTCAACCAATTTCCTGAGAGTTATCTCTATGGGGTGCCAGACTGGCCTTTTACCACGGGAGATGAAGATTTCCGGCGAGACTATCTAATGAAGCGTCGTCGGGCGAGTCAAGGGCATTATTATTGA | 444 | 47.97 | MEVVCESSKDEAGIKLFGKTIIFRSIKENEEEMKADRKTEEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKNKPVCGGLNQFPESYLYGVPDWPFTTGDEDFRRDYLMKRRRASQGHYY | 147 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 15672814 | 15673257 | - | Bda031553.1 | Bda09g00808 | 13058 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00808 | 147 | ProSiteProfiles | Zinc finger Dof-type profile. | 48 | 102 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00808 | 147 | ProSitePatterns | Zinc finger Dof-type signature. | 50 | 86 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00808 | 147 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 5 | 117 | - | - | |
Bda09g00808 | 147 | Pfam | Dof domain, zinc finger | 46 | 101 | IPR003851 | GO:0003677|GO:0006355 | |
Bda09g00808 | 147 | PANTHER | CYCLIC DOF FACTOR 2 | 5 | 117 | IPR045174 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00980 | Bda-Chr7:11642620 | Bda09g00808 | Bda-Chr9:15672814 | 2.40E-54 | dispersed | |
Bda09g00802 | Bda-Chr9:15503489 | Bda09g00808 | Bda-Chr9:15672814 | 1.19E-85 | dispersed | |
Bda09g00803 | Bda-Chr9:15524111 | Bda09g00808 | Bda-Chr9:15672814 | 7.67E-86 | dispersed | |
Bda09g00808 | Bda-Chr9:15672814 | Bda10g01065 | Bda-Chr10:44669598 | 3.52E-37 | dispersed | |
Bda09g00805 | Bda-Chr9:15566524 | Bda09g00808 | Bda-Chr9:15672814 | 1.57E-107 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16403 | PF02701 | zf-Dof | 2.80E-32 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00808 | - | - | pper:18778392 | 178.718 |