Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00808 ATGGAAGTGGTATGTGAAAGCAGTAAAGATGAAGCAGGAATCAAGCTGTTTGGGAAGACTATTATATTCCGAAGTATAAAAGAAAACGAAGAGGAAATGAAAGCTGATCGGAAGACGGAGGAGAAGAGGCCGGAAAAGATAATACCATGTCCGAGATGCAAGAGTATGGAGACCAAGTTTTGTTACTTCAACAACTACAACGTTAACCAACCCAGACATTTTTGCAAAGGTTGTCAGAGGTACTGGACCGCCGGAGGCGCCCTCCGCAACGTCCCAGTCGGCGCCGGACGCCGGAAGAACAAGCCAGTTTGTGGAGGCCTCAACCAATTTCCTGAGAGTTATCTCTATGGGGTGCCAGACTGGCCTTTTACCACGGGAGATGAAGATTTCCGGCGAGACTATCTAATGAAGCGTCGTCGGGCGAGTCAAGGGCATTATTATTGA 444 47.97 MEVVCESSKDEAGIKLFGKTIIFRSIKENEEEMKADRKTEEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKNKPVCGGLNQFPESYLYGVPDWPFTTGDEDFRRDYLMKRRRASQGHYY 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15672814 15673257 - Bda031553.1 Bda09g00808 13058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00808 147 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
Bda09g00808 147 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Bda09g00808 147 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 5 117 - -
Bda09g00808 147 Pfam Dof domain, zinc finger 46 101 IPR003851 GO:0003677|GO:0006355
Bda09g00808 147 PANTHER CYCLIC DOF FACTOR 2 5 117 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00980 Bda-Chr7:11642620 Bda09g00808 Bda-Chr9:15672814 2.40E-54 dispersed
Bda09g00802 Bda-Chr9:15503489 Bda09g00808 Bda-Chr9:15672814 1.19E-85 dispersed
Bda09g00803 Bda-Chr9:15524111 Bda09g00808 Bda-Chr9:15672814 7.67E-86 dispersed
Bda09g00808 Bda-Chr9:15672814 Bda10g01065 Bda-Chr10:44669598 3.52E-37 dispersed
Bda09g00805 Bda-Chr9:15566524 Bda09g00808 Bda-Chr9:15672814 1.57E-107 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16403 PF02701 zf-Dof 2.80E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00808 - - pper:18778392 178.718