Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00825 AAACAGATTATTGCAGAGGTGTTGGCGACGTATTTTCTGATATTTGCAGGCTGTTCATCAGTTGTGGTAAATCTTAGTAATGACAAAGTTGTTTCTGTTCCTGGAATTTCAATCGTTTGGGGGCTTGCGGTGATGGTCATGGTCTACTCAGTCGGGCATATCTCCGGTGCTCATTTCAATCCGGCTGTCACCATTGCCTTTGCTTCTACCAAGAGATTCCCTTGGAAACAGGTACCTCCTTATGTATCAGCTCAAATTGTTGGAGCAACCCTAGCAAGTGGTACCATTAGACTTTTATTTAACGAGAGAAACAGCGATTTTGCTCGAACACTTCCGTCCGGATCGCATGTTCAATCCCTTGTGATCGAATTCATAATCACTTTCGCTCTCATGTTTGTCATCTCTGGGGTTGCCACCGATAATAGAGCCATTGGTGAGCTGGCAGGTCTTGCAATTGGCGCAACGGTGGTTGTCAACGCGATGTTTGCTGGGCCAATATCAGGGGCGTCGATGAATCCAGCAAGAAGCTTAGGGCCTGCAATGGTGTCTAACAATTACAAAGGATTATGGATATACATAGTGGGTCCTACTCTTGGAGCAGTATGTGGAGCATGGGTCTACAACCTCATCAGATTTACCGATAAACCACTGCGAGAGATTACCAAAAGTGGCTCTTTCCTCAAAGGGTTGGGTAAAACCTGA 702 45.58 KQIIAEVLATYFLIFAGCSSVVVNLSNDKVVSVPGISIVWGLAVMVMVYSVGHISGAHFNPAVTIAFASTKRFPWKQVPPYVSAQIVGATLASGTIRLLFNERNSDFARTLPSGSHVQSLVIEFIITFALMFVISGVATDNRAIGELAGLAIGATVVVNAMFAGPISGASMNPARSLGPAMVSNNYKGLWIYIVGPTLGAVCGAWVYNLIRFTDKPLREITKSGSFLKGLGKT 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17868283 17875741 + Bda031591.1 Bda09g00825 13075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00825 233 PANTHER AQUAPORIN NIP2-1 2 228 IPR034294 -
Bda09g00825 233 Gene3D Glycerol uptake facilitator protein. 1 221 IPR023271 -
Bda09g00825 233 ProSitePatterns MIP family signature. 58 66 IPR022357 -
Bda09g00825 233 TIGRFAM MIP: MIP family channel proteins 5 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00825 233 PRINTS Major intrinsic protein family signature 153 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00825 233 PRINTS Major intrinsic protein family signature 122 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00825 233 PRINTS Major intrinsic protein family signature 1 20 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00825 233 PRINTS Major intrinsic protein family signature 40 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00825 233 PRINTS Major intrinsic protein family signature 190 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00825 233 PRINTS Major intrinsic protein family signature 77 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00825 233 CDD MIP 1 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00825 233 PANTHER AQUAPORIN NIP1-1-RELATED 2 228 - -
Bda09g00825 233 SUPERFAMILY Aquaporin-like 2 221 IPR023271 -
Bda09g00825 233 Pfam Major intrinsic protein 1 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00045 Bda09g00825 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00825 Bda-Chr9:17868283 Bda09g00827 Bda-Chr9:18008587 7.15E-138 dispersed
Bda09g00825 Bda-Chr9:17868283 Bda09g00826 Bda-Chr9:17878049 2.73E-152 tandem
Bda02g00045 Bda-Chr2:2083483 Bda09g00825 Bda-Chr9:17868283 1.06E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00825 K09874 - mnt:21388091 377.867