Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00826 ATGGCAGAAAATTCAGAAAGCAATGGAAATCATGGAGTGGCTTTGAATGTGAGAGATGAGGAAGCAAAGGCCAACTGTTCATCGTCCGTGCTCTTCTCCGTACCTTTCATCCAAAAGATAATTGCAGAGGTGTTGGGGACATATTTTCTGATATTTGCAGGCTGTTCATCAGTTGTGGTGAATCTGAGTGAAGGCAAAGTTGTTTCTCTTCCTGGAATTTCAATCGTTTGGGGGCTTGCGGTGATGGTCATGATCTACTCAGTCGGCCATATCTCCGGTGCTCATTTCAATCCGGCTGTCACCATTGCCTTCGCTTCTACCAAGAGATTCCCTTGGAAACAGGTACCTCCTTATGTATCAGCTCAGATTGTTGGAGCAACCCTAGCAAGTGGCACCATCCGACTTTTATTTAACGGGACACAAAACCATTTTGCCGGAACACTTCCTTCGGGATCAGACGTTCAATCACTCGTGATCGAATTCATCATCACTTTCTATCTCATGTTTGTCGTCTCCGGGGTTGCCACGGATAACAGAGCCATTGGTGAGCTGGCAGGTCTTGCCATTGGCGCAACGGTGCTTCTCAACGTGATGTTTGCAGGGCCAATTTCAGGGGCATCAATGAACCCAGCAAGAAGCTTAGGGCCTGCAATGGTGTCAAACAATTACCGAGGAATATGGATATACATAGTGGGTCCTACTCTTGGGGCAGTATGTGGAGCATGGGTCTACAACGTCATCAGATTTACCGACAAACCACTGCGAGAGATCACCAAAACTGGCTCTTTCCTAAAAGGGTTGGGTAAAAACTGA 813 46.86 MAENSESNGNHGVALNVRDEEAKANCSSSVLFSVPFIQKIIAEVLGTYFLIFAGCSSVVVNLSEGKVVSLPGISIVWGLAVMVMIYSVGHISGAHFNPAVTIAFASTKRFPWKQVPPYVSAQIVGATLASGTIRLLFNGTQNHFAGTLPSGSDVQSLVIEFIITFYLMFVVSGVATDNRAIGELAGLAIGATVLLNVMFAGPISGASMNPARSLGPAMVSNNYRGIWIYIVGPTLGAVCGAWVYNVIRFTDKPLREITKTGSFLKGLGKN 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17878049 17879701 + Bda031592.1 Bda09g00826 13076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00826 270 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 TIGRFAM MIP: MIP family channel proteins 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Bda09g00826 270 SUPERFAMILY Aquaporin-like 31 257 IPR023271 -
Bda09g00826 270 PANTHER AQUAPORIN NIP2-1 2 265 IPR034294 -
Bda09g00826 270 Pfam Major intrinsic protein 33 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00826 270 Gene3D Glycerol uptake facilitator protein. 3 258 IPR023271 -
Bda09g00826 270 PANTHER AQUAPORIN NIP1-1-RELATED 2 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00045 Bda-Chr2:2083483 Bda09g00826 Bda-Chr9:17878049 2.48E-154 dispersed
Bda09g00826 Bda-Chr9:17878049 Bda12g00572 Bda-Chr12:11762990 2.65E-70 dispersed
Bda09g00825 Bda-Chr9:17868283 Bda09g00826 Bda-Chr9:17878049 2.73E-152 tandem
Bda09g00826 Bda-Chr9:17878049 Bda09g00827 Bda-Chr9:18008587 4.02E-124 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00826 K09874 - egt:105969166 426.402