Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00838 ATGGCAGTGCAGCTGAGTCCTAGCAACATGGTTTTATTCTGTAATCTGCTACTCACAAAGGATGGCCTTGGAATTTGTTTATCGAACATATTACTCGATAACTCGACAACCATAGCAATCGCTTTTCCAAAGTCGCAAAAAACTTACCGGGTAAATGGGAAGGAGCTCAAAGGATGGTTCGCCAACGATTACACGTCTGACCAGCTCTTCAACAAAGTATCATTGGCACAAAATACATACTCTCGGCCGAGTTTGTTTGATGGTCTATTGCCGATAGCAGCTGTCGAAGATGTGGTGGGAGTCAAACCACCCCAATTTTGGTTGAATGTTCAGTTTGATTCCTTTTATACTGAGCACAATCTCAGTGCAACATCTTACTGTCATAGGGCATTGAAACTTTTACGAATAAATTACCTTTCGTCTCCGGAGATTAACTTCTTGAAATCAATGAACGGGTCGGTGAACAAAGCCAGGACGAAGCTCGTCTTCCAGCTGCTCGGCCCGGATGAAGTCGAGCCGACAACGAACGAGAAATACGGTTCATTGGCGCAAAATCTTACCTTCATCAAGTCATTTGCAGCTGGTATTCTTGTCCCAAAAGAATACATTTGGCCTGTCAATGCAAAGAAATACTTGGAAGCTCCGACAAGTCTCGTCCTCGACGCTCATAACAAAGGGCTGGAAGTTTATGCATCTGGTTTTGCAAATGATATCATATCAAGTTACAATTACAGCTATGATCCATCAGCTGAGTACCTCCAATTTATGGATAATGGCAAGTTTTCTGTTGATGGTTTTCTCACAGACTTCCCTCCTACAGCAACAGAAGCCATTGAATGCTTTGCAAATAACAGAAATGGCACCAAGCCTAGACAAGGCCAACCTCTGATCATAACTAGCAACGGAGCGAGTGGGATTTATCCGGGCTGCTCCGATCTATCATACGAGCAAGCGGTGGAAGACGGCGCCGACATTATCGATTGCTCGGTTCAATTATCCAAAGATGGAGTTGCTTTCTGCTTGGATTCGCCGGATGTCATGGGGGATACCACAGCGATAACTTCCTTCATGTCACGGTCGTCGACCGTCCCCGAAATTCAGTCCAATCCTGGAATTTTTTCGTTCGATCTTACTTGGAGCGAGATTCAATCGTTGAAGCATCAATTAGTGAGCCCTTTCTTGAGTGCCGCTGGTTTTGAAAGAAATCCAGAAAACAAGAACAAAGGACAATTTGTGACGCTTCCTGAATTTCTAGAGTTTGCTAAAACCAAGGCAGTGACTGGTGTCTTAATCAACATTGAGTTAAAATCCCTTCACTATATTTCACAGAATGCTCCCTACTTAGCATCAGAGAAAGGTCTTGACCTTGTGGGCACTGTTGCAGCAGCTCTCAGCAACGCCACCTTTGACCAGCAATCCACACAACAAGTCTTGATCCAATCAGATGACACTTCAGTTCTGTCAAAGTTTAAGAATGTTCAGCAGTACACAAGAGTCTTGTCCGTGAAGGAAAAAATTGGAGATGCACCCAAGCAATCAGTAGATGAGATCAAGAAGTTTGCCGATGCAGTATCCATTCCGAGAGCCTCCGTCGTCAGAGTTTCTGACTACTTCACCACGGGCCTAACCCGTGTGGTGGAAGAGCTTCATGCTGCAGAAATATCGGTCTACGTCTCGGTGCTACGGAACGAATACGTATCTCTAGCATTTGACTATTTCTCTGATCCGACCCAGGAGATTGCCACTTATGTTCAAGGAATTGGAGTTGATGGAATCATAACAGAATACCCAGGAACTGCTTCCAAATATTTGAGAAGCCCTTGTGCAAAGTCTGATCCAAAAGCGAAAGTTCCATACACAATCTTACCAACTCAAGCTGGTTCTTTGCTGGAACTGGTTCCATCAGAAGTGAAGCCACCGGCAGAAGCCCCCAATCCATCTCTGGAGGTGGCAGATGTGGTTGACCCACCACTGCCGCCAGTATCAGACGCTGCCTCTGCTGGTCCGGCCAGTAAGCCAGCTGATGACAGTGCCTCCAGGGGTTTGAAAGTTGCTACCATGAGTCTTTCTCTAGCTATAATTATGGTCTTTAGCTTGCTTTCAATGAAATGCTAA 2115 45.15 MAVQLSPSNMVLFCNLLLTKDGLGICLSNILLDNSTTIAIAFPKSQKTYRVNGKELKGWFANDYTSDQLFNKVSLAQNTYSRPSLFDGLLPIAAVEDVVGVKPPQFWLNVQFDSFYTEHNLSATSYCHRALKLLRINYLSSPEINFLKSMNGSVNKARTKLVFQLLGPDEVEPTTNEKYGSLAQNLTFIKSFAAGILVPKEYIWPVNAKKYLEAPTSLVLDAHNKGLEVYASGFANDIISSYNYSYDPSAEYLQFMDNGKFSVDGFLTDFPPTATEAIECFANNRNGTKPRQGQPLIITSNGASGIYPGCSDLSYEQAVEDGADIIDCSVQLSKDGVAFCLDSPDVMGDTTAITSFMSRSSTVPEIQSNPGIFSFDLTWSEIQSLKHQLVSPFLSAAGFERNPENKNKGQFVTLPEFLEFAKTKAVTGVLINIELKSLHYISQNAPYLASEKGLDLVGTVAAALSNATFDQQSTQQVLIQSDDTSVLSKFKNVQQYTRVLSVKEKIGDAPKQSVDEIKKFADAVSIPRASVVRVSDYFTTGLTRVVEELHAAEISVYVSVLRNEYVSLAFDYFSDPTQEIATYVQGIGVDGIITEYPGTASKYLRSPCAKSDPKAKVPYTILPTQAGSLLELVPSEVKPPAEAPNPSLEVADVVDPPLPPVSDAASAGPASKPADDSASRGLKVATMSLSLAIIMVFSLLSMKC 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19114647 19118239 - Bda031614.1 Bda09g00838 13088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00838 704 SUPERFAMILY PLC-like phosphodiesterases 14 278 IPR017946 GO:0006629|GO:0008081
Bda09g00838 704 Gene3D Phosphatidylinositol (PI) phosphodiesterase 11 278 IPR017946 GO:0006629|GO:0008081
Bda09g00838 704 Gene3D Phosphatidylinositol (PI) phosphodiesterase 293 605 IPR017946 GO:0006629|GO:0008081
Bda09g00838 704 MobiDBLite consensus disorder prediction 638 679 - -
Bda09g00838 704 ProSiteProfiles GP-PDE domain profile. 295 604 IPR030395 GO:0006629|GO:0008081
Bda09g00838 704 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL6-RELATED 1 702 - -
Bda09g00838 704 CDD GDPD_SHV3_repeat_2 295 603 - -
Bda09g00838 704 Pfam Glycerophosphoryl diester phosphodiesterase family 301 599 IPR030395 GO:0006629|GO:0008081
Bda09g00838 704 CDD GDPD_SHV3_repeat_1 2 277 - -
Bda09g00838 704 ProSiteProfiles GP-PDE domain profile. 1 278 IPR030395 GO:0006629|GO:0008081
Bda09g00838 704 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 1 702 - -
Bda09g00838 704 SUPERFAMILY PLC-like phosphodiesterases 295 604 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00387 Bda-Chr7:4865272 Bda09g00838 Bda-Chr9:19114647 1.59E-10 dispersed
Bda09g00838 Bda-Chr9:19114647 Bda12g00943 Bda-Chr12:40508837 0 dispersed
Bda09g00838 Bda-Chr9:19114647 Bda09g00415 Bda-Chr9:5133560 5.20E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00838 - - jre:109012902 922.154