Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00841 ATGATTGTGGAAAATCAAAGAAGTGGTTTGGCTGCTGAAAATGGATCCGCCGACGGATTCCCGGTGGGTATGCGTGTTCTTGCCGTCGACGACGACCCTATTTGCCTCAAAGTTTTGGAGAATCTGCTTCGCAGATGCAAATATCACGTTACCACTACAAATCAGGCGGTCCAGGCTCTGAAAATGTTGAGGGAAAACAGAAATATGTTTGACCTTGTTATCAGTGATGTAAATATGCCGGACATGGATGGATTTAAACTCCTTGAGCATGTGGGGCTCGAAATGGACTTGCCCGTTATCATGTTGTCAGCTCATAGCGATACCGAGCTTGTAATGAAGGGCGTTACTCATGGTGCTTGCGATTATTTGCTGAAGCCTGTTCGAATCGAGGAGCTAAAGAACATATGGCAACACGTGATTCGAAGAAGGAAGTTTGATTTAAAAGAACAAAACAATTCCACCAATCAAAACATTTATCAGCAAGGAAACACCGAAAGCGAACAAGCTTTTTCCTCGACCGAAAATGGTGAAAATGGGAAACTGAACAGAAAGCGGAAGGATCAAAACGAAGATGAAGAAGAGGAAGGGGAAGAGACTGAACATGAGAATGAAGACCCTTCAACCCAGAAGAAGCCTCGAGTAGTTTGGTCGGTCGAGTTGCACCGGAAATTCGTGGCAGCTGTTCATCAGCTCGGCCTTGATAAGGCTGTTCCGAAGAAGATACTTGATCTAATGAATGTTGAAGGACTCACAAGAGAAAATGTAGCCAGCCATTTGCAGAAATACAGGCTCTACCTGAAAAGAATCAGCAGTGTGGCAACCCAGCAAGCTAATATTGCTGCTGCTTTGGGAGTTAAAGATGCCTCTTACATGCGAATTGGGACCATTGACGGATTTGGAGACTTGTGCTCCTTAGCTGGAAATGGAAGATTTTCAAACACATCATTATCATCATATCCACCCGGTGGAATGCTCGGAAGATTGAATACACCAGCCGGATTGACCCTTCATGGAATCGCTTCTTCTGGGCTCGTGCAACAAGGCAATTCCCAAAACTTAAATAACCCGGCGACTACTCTTGGTAAAGTTGAGGCTGGAATGTGTTCTACGAGTCAAACTCCAAGCATATTTCAAGGGATTCCAACTTCATTACAGATCAGTCAGTTGCAGCCGGCAAAACCCAGTACTGTGATGAAAGAGTTTAACCCCATTAATGGTGGATCGGGTTTTACACTATCGAACAATTCTATGTCCACTTCGTCTTTGGTATTACAAGGTAATACGACTCAAATACCAAGTAGGAGAGGATTTGGAGCTGAATCTTCTGCAAAAGTGGCTTCATCGAGTCAAGATTCTTTCGATATTGGCATCAACAGTTCTAATAACTTAGATCACAATCGATGCGATGAAAACTGGAATCACGCAGTTCAAATGTCCAGTTTCTCATTAAATCCGTTTGAGAATTATGCACATGATCGATTGACTTCAAATAACATGTGTATTTCTACTACCCATTCTAGTATTGGGAGAGTTCCTATTGATTACTCTTCGACTTGTGCCGTTTTGGATCCTAAGCAGGATTCAAGTGGGGATCGATACCAAGAAGGGTTAATCGGAAATATTGTTCAAACGATGAATGTTCTACCAAAACGAAGGTTGGAAGAAAATAGGCATGGTTTCCGTCAGAATATGAATCATTCTTACACAGCTGTAGATTGTATGGGTTCTTCTGGTTTCTTAGGGTCGAGTATGGACCAAAATAATACAGCCGGTCGTAAAGTGTTTGATGTTTCTTTCAGTAATCATTTAATAACGGGTGGATCTCCTTTATATGTTCAGCATGGGAACAGTCTCTTATATCAAGCTAAATCGAAGGATGGAGCTGTTCAAAGCAATTACGAATCATTTGATGATGTCATGAATGCAATGATCAAACAGGTATGGTCAAATATTTGGCTTAAATATCAAATTTAA 1974 41.89 MIVENQRSGLAAENGSADGFPVGMRVLAVDDDPICLKVLENLLRRCKYHVTTTNQAVQALKMLRENRNMFDLVISDVNMPDMDGFKLLEHVGLEMDLPVIMLSAHSDTELVMKGVTHGACDYLLKPVRIEELKNIWQHVIRRRKFDLKEQNNSTNQNIYQQGNTESEQAFSSTENGENGKLNRKRKDQNEDEEEEGEETEHENEDPSTQKKPRVVWSVELHRKFVAAVHQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISSVATQQANIAAALGVKDASYMRIGTIDGFGDLCSLAGNGRFSNTSLSSYPPGGMLGRLNTPAGLTLHGIASSGLVQQGNSQNLNNPATTLGKVEAGMCSTSQTPSIFQGIPTSLQISQLQPAKPSTVMKEFNPINGGSGFTLSNNSMSTSSLVLQGNTTQIPSRRGFGAESSAKVASSSQDSFDIGINSSNNLDHNRCDENWNHAVQMSSFSLNPFENYAHDRLTSNNMCISTTHSSIGRVPIDYSSTCAVLDPKQDSSGDRYQEGLIGNIVQTMNVLPKRRLEENRHGFRQNMNHSYTAVDCMGSSGFLGSSMDQNNTAGRKVFDVSFSNHLITGGSPLYVQHGNSLLYQAKSKDGAVQSNYESFDDVMNAMIKQVWSNIWLKYQI 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19284393 19287463 - Bda031621.1 Bda09g00841 13091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00841 657 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Bda09g00841 657 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Bda09g00841 657 Gene3D - 23 162 - -
Bda09g00841 657 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 648 - -
Bda09g00841 657 Coils Coil 182 202 - -
Bda09g00841 657 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Bda09g00841 657 MobiDBLite consensus disorder prediction 151 211 - -
Bda09g00841 657 SUPERFAMILY CheY-like 23 147 IPR011006 -
Bda09g00841 657 MobiDBLite consensus disorder prediction 151 177 - -
Bda09g00841 657 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Bda09g00841 657 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 648 IPR045279 GO:0009736
Bda09g00841 657 PIRSF RR_ARR_type-B 4 655 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bda09g00841 657 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
Bda09g00841 657 Gene3D - 207 270 - -
Bda09g00841 657 SMART REC_2 24 136 IPR001789 GO:0000160
Bda09g00841 657 CDD REC_typeB_ARR-like 26 140 - -
Bda09g00841 657 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda09g00841 Bda11g00074 CCT
Bda01g01967 Bda09g00841 CCT
Bda09g00841 Bda11g00074 ECH
Bda01g01967 Bda09g00841 ECH
Bda02g00326 Bda09g00841 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01967 Bda-Chr1:56059137 Bda09g00841 Bda-Chr9:19284393 5.26E-147 dispersed
Bda06g00394 Bda-Chr6:6146434 Bda09g00841 Bda-Chr9:19284393 5.53E-18 dispersed
Bda09g00841 Bda-Chr9:19284393 Bda11g00074 Bda-Chr11:917530 4.44E-141 dispersed
Bda13g00605 Bda-Chr13:7059119 Bda09g00841 Bda-Chr9:19284393 1.22E-17 dispersed
Bda13g01015 Bda-Chr13:11905305 Bda09g00841 Bda-Chr9:19284393 3.06E-11 dispersed
Bda13g01038 Bda-Chr13:12128464 Bda09g00841 Bda-Chr9:19284393 8.03E-09 dispersed
Bda09g00841 Bda-Chr9:19284393 Bda02g00326 Bda-Chr2:43285358 1.16E-160 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16408 PF00072 Response_reg 1.00E-25 CL0304 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00841 K14491 - qsu:112019876 703.745