Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00860 ATGGGATTATCCCAAGCTTTCTTGCTTTCTCTATTTCTTTCTTTAAATTGCTTCAGCGGAAGCAGCACGGAATTTGAAGTGGGTGATGAAGATGGGTGGGTCGTTCCTCAAGCAAAGAGTGACAGCCAAAAGTACAACCAGTGGGCCTCCAGAAACAGGTTCAAGGTTGACGACACAGTTCACTTCAAGTACAAGAAAGACTCAGTTTTGGTGGTGACAGAGGACGAATATGACCGGTGTCATTCTTCTCACCCAACCTTCTTCTCCAACAATGGCGACTCAGTGTTCAAACTGGACAGACCAGGGCTCTTCTTCTTCATCAGCGGAGTTTCCGGCCACTGCGAGAGGGGTCAGAAGATGATCATCAAAGTGCTGGATGTAGCCGCAGCTTCTCCCGTCCCAGCCAATCAAACGGTCGCCGCTGCTCCTTCCATTTCTGCCCCCATCATTCTTCTGCTGGCTTTCCCATTTGCTGGGATGCTATTCGCCTGA 492 49.59 MGLSQAFLLSLFLSLNCFSGSSTEFEVGDEDGWVVPQAKSDSQKYNQWASRNRFKVDDTVHFKYKKDSVLVVTEDEYDRCHSSHPTFFSNNGDSVFKLDRPGLFFFISGVSGHCERGQKMIIKVLDVAAASPVPANQTVAAAPSISAPIILLLAFPFAGMLFA 163
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 21054413 21054985 - Bda031657.1 Bda09g00860 13110
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00860 163 Gene3D - 22 129 IPR008972 -
Bda09g00860 163 PANTHER BLUE COPPER PROTEIN 9 151 IPR039391 GO:0009055
Bda09g00860 163 Pfam Plastocyanin-like domain 38 118 IPR003245 GO:0009055
Bda09g00860 163 SUPERFAMILY Cupredoxins 22 125 IPR008972 -
Bda09g00860 163 CDD OsENODL1_like 23 125 IPR041846 -
Bda09g00860 163 PANTHER EARLY NODULIN-LIKE PROTEIN 6 9 151 - -
Bda09g00860 163 ProSiteProfiles Phytocyanin domain profile. 23 126 IPR003245 GO:0009055
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00300 Bda-Chr6:4977900 Bda09g00860 Bda-Chr9:21054413 4.12E-31 dispersed
Bda09g00514 Bda-Chr9:6802308 Bda09g00860 Bda-Chr9:21054413 4.59E-38 dispersed
Bda09g00860 Bda-Chr9:21054413 Bda12g00590 Bda-Chr12:15613676 1.15E-117 dispersed
Bda09g00860 Bda-Chr9:21054413 Bda14g00907 Bda-Chr14:7041790 6.26E-78 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00860 - - jre:109003316 193.741