Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00876 | ATGTCTTCGAAATCTGGCAGTAGCAGCGCAACTCGTGTTGGGAAGTATGCATTAGGCCGTACTTTGGGCGAAGGTAACTTCGCCAAGGTTAAATTTGCTCGGAACATGGAGAGCGGCCAGAATGCGGCGATCAAAATCCTTGATAAGGAGAAACTTTTCAAGTACAAGATGATAGACCAGATTAAAAGAGAAATATCAACAATGAAACTAATCAGACATCCTAATGTCATCCGCATGTATGAGGTAATGGCTAGCAAGACCAAAATTTACATTGTCATGGAATTTATTACTGGTGGAGAATTGTTTGGCAGAATTGCGAGTACAGGGAGATTTAAAGAAGATGAGGGAAGGAAGTACTTTCAGCAGCTTATTAATGCTGTGGATTATTGTCATAGCAGAGGTGTTTTTCATAGGGACCTAAAGCCTGAAAATTTGTTGCTGGATTCGAATGGAGTTCTTAAAGTTTCTGACTTTGGGTTGAGCGCTCTACCTCAGCAAGTTCGAGGAGATGGACTGCTTTACACAACATGTGGAACACCAAATTATGTTGCCCCAGAGGTGATCAATAACAAAGGCTATGATGGAGCGAAGGCAGATCTATGGTCATGTGGTGTAATTCTTTTTGTCCTAGTGGCTGGTTACCTTCCCTTCGAAGACTCCAACCTCACAACATTGTACAAAAAGATACATAAAGCTGACTTCTGTTGTCCGTCATGGTTTTCGACGGGTGCCAAGAAATTAGTCAAGAGAATTTTGGATCCCAACCCCTCAACTCGAATTACCATTGCTGAGGTTATTAAGAATGAATGGTTTAAGAAAGGATATAAACCACCCGTTTTTGAACATTCTGCTGTTCATTTTGATGATGTTGATGCTATCTTCGATGAATCAGTGGATACACATAACCTTGTTGTAGAGAGCAGAGAAGAAAGGCCTATGGGTCCTGTCACCATGAATGCTTTTGAGCTTATCTCTACATCTCAGGGTCTCAACCTTGGGACACTTTTTGAGAAGCAAATGGGACTTGTCAAATGTGAAACGAGGTTCACATCCAAGTGTCCAGTTAATGAGATCATTTCCAAGATTGACGATGTTGCAACTCCCTTGGGATTTAATGTGAAGAAAAATAACTTCAAGATGAAACTTCAAGGAGGCAACACTGGTCGGAAAGGTCATTTATTAGTTGCAACTGAGATTTATGAAGTTGCCCCTTTGCTTTACATGGTTGAAGTTCGCAAGTCTGGGGGAGATACTTTAGAATTTCATGAGTTCTATAAAAATCTCTACACTGGGCTGAAAGATATAGTATGGAAAACTGATGATAACACAGAGGAAGCAACTGCTGGTACTTCTGTTGTCAAATCTATGTAG | 1371 | 40.77 | MSSKSGSSSATRVGKYALGRTLGEGNFAKVKFARNMESGQNAAIKILDKEKLFKYKMIDQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVMEFITGGELFGRIASTGRFKEDEGRKYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGVLKVSDFGLSALPQQVRGDGLLYTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLVAGYLPFEDSNLTTLYKKIHKADFCCPSWFSTGAKKLVKRILDPNPSTRITIAEVIKNEWFKKGYKPPVFEHSAVHFDDVDAIFDESVDTHNLVVESREERPMGPVTMNAFELISTSQGLNLGTLFEKQMGLVKCETRFTSKCPVNEIISKIDDVATPLGFNVKKNNFKMKLQGGNTGRKGHLLVATEIYEVAPLLYMVEVRKSGGDTLEFHEFYKNLYTGLKDIVWKTDDNTEEATAGTSVVKSM | 456 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 22627210 | 22651268 | + | Bda031685.2 | Bda09g00876 | 13126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00876 | 456 | Pfam | NAF domain | 315 | 375 | IPR004041 | GO:0007165 | |
Bda09g00876 | 456 | Gene3D | Kinase associated domain 1, KA1 | 313 | 438 | - | - | |
Bda09g00876 | 456 | CDD | STKc_SnRK3 | 15 | 270 | - | - | |
Bda09g00876 | 456 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 303 | IPR011009 | - | |
Bda09g00876 | 456 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 95 | - | - | |
Bda09g00876 | 456 | CDD | CIPK_C | 319 | 434 | - | - | |
Bda09g00876 | 456 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 45 | IPR017441 | GO:0005524 | |
Bda09g00876 | 456 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 278 | - | - | |
Bda09g00876 | 456 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 10 | 443 | - | - | |
Bda09g00876 | 456 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 135 | 147 | IPR008271 | GO:0004672|GO:0006468 | |
Bda09g00876 | 456 | PANTHER | SERINE/THREONINE KINASE | 10 | 443 | - | - | |
Bda09g00876 | 456 | Pfam | Protein kinase domain | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00876 | 456 | SMART | serkin_6 | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00876 | 456 | ProSiteProfiles | Protein kinase domain profile. | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00876 | 456 | ProSiteProfiles | NAF domain profile. | 313 | 337 | IPR018451 | GO:0007165 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda02g00137 | Bda09g00876 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00137 | Bda-Chr2:19715219 | Bda09g00876 | Bda-Chr9:22627210 | 0 | dispersed | |
Bda09g00876 | Bda-Chr9:22627210 | Bda13g00406 | Bda-Chr13:5008980 | 0 | dispersed | |
Bda02g00321 | Bda-Chr2:43221950 | Bda09g00876 | Bda-Chr9:22627210 | 9.73E-40 | wgd | |
Bda02g00217 | Bda-Chr2:37984911 | Bda09g00876 | Bda-Chr9:22627210 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69807 | PF00069 | Pkinase | 6.20E-72 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00876 | - | - | zju:107414012 | 741.88 |