Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00897 ATGTTGGAGAAAGTAATTTCATCACCAGTAACCAATAGTGAATGTATGCCTGAATCAATTCGAAAGAATTTTACCACCCTTAAATCAACTCTTGCACCCATATTGAAGAGGTCTGCCTCTGATGGTTTCAACTGGAGGAAATACGGTCAAAAACAAGTAAAGAGTCCCAGAGGTTCTCGAAGCTATTATAAGTGCACTTACTTGGAATGCCTTGCTAAGAAAATTGAATGCTGTGACCACTCAGGCCATGTAACAGAGATTGTTTACAAGAGCCAGCATAATCATGATCCCCCAAGGAAGATTAGCAGCATGAGGGAACGCAAGCTTCTCTCATCTGAGGATTCTGTTGTCAGGGATGTAGAACACAGTAGAACAGCTGAAAATACAGACCCATCTACATCTTTAAAAGAACCTGACCAAGAAAAATATGCTGTTTCTGAATTTGAAAGAAAACGAGAGCATTCAATCTCCTACTCTAATGGGAATGGTGATATTGTTGTCAAAGAGGAAGACTTAAATGCACCAGAACCAAAGAGAAGGGTGAAGAAAAGTAATACAGAACATTCAGGTTCACTTTTCAAACTGGGGAAGAAGCAAAAATTTGTTGTGCATGCGGCCGTTGATGTGGGGATTTCAGGTGATGGATACAGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGAAATCCTTACCCTCGGAACTACTACAGATGCACTTCAGCTGGATGTCCTGTCCGTAAGCACATTGAGACAGCTGTTGATAACCCAAGTTCTGTAATCATAACCTACAAGGGTGTACATGACCATGGCATGCCTGTGCCAAAGAAACGGCACGGCCCGCCAAGTGCACCTTTAGTTGCTGCTTCAGCTCCTGCTTCCATGAACAACATGCAAGTCAAAAAAACTGAAATATTGCAAAACCAAATGCCTTCAACACAGTGGTCTGTTGACACCAAGGGCGGATTAACTGGCGAGGCTTTGGACCTTGGAGGTGATAAGGCAATAGAATCAGCTCGAACTCTTTTGAGCATGGGATTCGAAATAAAACCGTGCTGA 1056 42.8 MLEKVISSPVTNSECMPESIRKNFTTLKSTLAPILKRSASDGFNWRKYGQKQVKSPRGSRSYYKCTYLECLAKKIECCDHSGHVTEIVYKSQHNHDPPRKISSMRERKLLSSEDSVVRDVEHSRTAENTDPSTSLKEPDQEKYAVSEFERKREHSISYSNGNGDIVVKEEDLNAPEPKRRVKKSNTEHSGSLFKLGKKQKFVVHAAVDVGISGDGYRWRKYGQKMVKGNPYPRNYYRCTSAGCPVRKHIETAVDNPSSVIITYKGVHDHGMPVPKKRHGPPSAPLVAASAPASMNNMQVKKTEILQNQMPSTQWSVDTKGGLTGEALDLGGDKAIESARTLLSMGFEIKPC 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 25106065 25109349 + Bda031740.2 Bda09g00897 13147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00897 351 MobiDBLite consensus disorder prediction 91 126 - -
Bda09g00897 351 SUPERFAMILY WRKY DNA-binding domain 39 98 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 19 349 - -
Bda09g00897 351 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 349 IPR044810 GO:0003700
Bda09g00897 351 MobiDBLite consensus disorder prediction 91 141 - -
Bda09g00897 351 Pfam WRKY DNA -binding domain 41 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 Pfam WRKY DNA -binding domain 214 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 SUPERFAMILY WRKY DNA-binding domain 205 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 ProSiteProfiles WRKY domain profile. 207 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 ProSiteProfiles WRKY domain profile. 40 98 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 Gene3D WRKY domain 197 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 Gene3D WRKY domain 32 99 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 SMART WRKY_cls 39 97 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g00897 351 SMART WRKY_cls 212 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00897 Bda-Chr9:25106065 Bda09g01561 Bda-Chr9:47169033 3.56E-46 dispersed
Bda09g00897 Bda-Chr9:25106065 Bda12g00175 Bda-Chr12:1652777 1.43E-50 transposed
Bda09g00897 Bda-Chr9:25106065 Bda12g00951 Bda-Chr12:40590110 5.60E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16414 PF03106 WRKY 6.00E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00897 - - zju:107426870 484.952