Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00900 ATGCAGCAGGGTGATCAGACAGTTTTGAGCTTGAGACCTGGTGGTGGTCGAGGCAGGCTACTTGGTCCTCGTTTTGATTCTTCCTCTTCTTCGTCTTCCTCATTTGCCTTTGGTTCCTTTTCCTCTGATCTTCCTTCACTTCGTCCTCATGCCGCTCATCCTCCTCCTAATCTAAAGGCCGGAGAGTCACCCTTTGATGGCCGTGAACGTGTGCGCTACACCAGGGATCAGCTGTTACAGCTCAGGGAGACTTTTGAAGTTCCAGATGAAATGTTAAAACTCAAACAAGAAATAGAAGTTGAATTTTTTGGTGATGATCAAAATTGGAACCGCGGAGAGATCAATACAACAAATCAGCCGCAGAATCGCTACTCTGAACCAGACAATCGTGACTGGCGTGGCAGGTCTGCAAATATAACTTCCCCTGGAGAGGATAGATCCAGGGATACCATTCGAGATATACATAGTGGTGGTCGATTTGACTCAAGACAGCAAGAGGCAAATCAATTCACTCGCCAGGACCAACTTAACAATCAGTTTTCAAAGTCGGGACCTGCAACTACTCTAGTCAAGGCAGAGGTACCATGGTCGGCGAGGAGAGGGAACTTATCTGAAAAGGAACGTGTCCTGAAGACTGTTAAAGGGATCTTGAATAAGCTGACGCCTGAAAAATTTGATATCCTCAAAGGTCAGCTAATTGATTCCGGGATTACCTCAGCTGATATTTTGAAGGATGTTATATCATTGATATTTGACAAAGCTGTGCTTGAACCCACATTTTGCCCAATGTATGCTCTTTTGTGTTCTGATCTTAATGAAAAGCTCCCGCCATTTCCCTCTGACGAACCAGGTGGAAAAGAAATTACTTTTAAGCGAGTCCTCTTAAATAACTGCCAGGAGGCTTTTGAAGGTTCTGACCAGTTGCGGGAAGAAATGAGACTAATGACTGCCCCTGAACAAGAACTTGAACGTAGGGATAAGGAAAGACTGATTAAACTTCGAACACTTGGAAATATTAGATTAATTGGAGAGCTTCTAAAGCAGAAGATGGTGCCTGAGAAGATTGTTCATCACATTGTTCAGGCACTTTTAGGACCCGATAGTAATACCTGTCCAGCTGAAGAAAATGTAGAGGCAATTTGTCAGTTTTTCAACACTATTGGTAAGCAAATGGACGAGAGCCCAAAATCACGTCATATAAACGAAACGTACTTTATCCGACTGCGAGATCTGACCAAGAACACTCAGCTGGCTCCACGATTACGATTCATGGTCCGTGATGTGCTTGATTTGCGAGCGAACAACTGGATTCCGCGGCGTGAAGAGGTAAAAGCTAAAACCATCAACGAAATCCATTCAGAAGCTGAAAAAACTCTTGGATTGCGTCCTGGTGCAACTGCAAGCATTAGAAATAATCGAGGAATTGTGTCTAATCCGCCGGGAATTACAAGCACTGGAGGATTTCCCATAATTCGACCTGGTTTGGGGGGTATGATGCCCGGAATGCCTGGAACTAGGAAGATGCCTGGGATCCCCGGGCTGGACAATGACAGCTGGGAGGGGCAGAGGACTCGATCAATGCCAAGAGGTGAAGGATCTCCTATGCAACTTGCTGGGCGAGGACCAAATCCATTGGTTACTAAATCGTCAGCATCAAGCACCAGGCTGTTACCTCAGGGTAGTGGTGGGGTCTTAAGTGGGAAAACTAGTGCCCTTCTGCAGGGTTCTAACCCATCTCCTACTCGACCCAGCAATATTGGCTTCGTTTCAGAGCCTTCTGCTGAAGCTCTTAAACCTGTTTTTCCTTTGAATACTGCTCCAACGTCTGAGCAGCCGAGGGTTCATCCTTCAAGTGTTAATCTTGATTATCTGAGGAAGAAAGCATCGTCACTTCTAGAAGAGTATTTCAGCATCAGGATTCTTGATGAAGCTGCAATGTGCGTGGAGGAGCTCAAGTCTCCAAATTATCATCCTGAGGTTGTGAAGGAAGCTATTTCCATGTCTCTGGAGAAAAGTCCACCATGTGTTGAAGCCGTGTTAAAGCTTATCGAGTTTTTATTTGCGAGGAAGATTCTTTCTGTCAGAGACGTAGGGACTGGATGCTTGCTTTATGCCTCTATGCTTGACGATATAGCCATTGATCTGCCAAAAGCACCACATAATTTTGGAGAAATCATGGGGAAACTCGTTTTGTTTGGTGGCTTGGATTTTAAGGTGGTGAAGGAGGTTCTTAAGAAGGTTGAAGATGACTTTTTCCAAAAAGCTATCTTGGACGCTGTGTTGAGGACTGTCTACCAAAGTTCATCTGGAAAAGGTGTGATGGATTCACAGGCCTCTGATATTGAGGCCTGTCGGAGTCTTCTCAGT 2367 45.12 MQQGDQTVLSLRPGGGRGRLLGPRFDSSSSSSSSFAFGSFSSDLPSLRPHAAHPPPNLKAGESPFDGRERVRYTRDQLLQLRETFEVPDEMLKLKQEIEVEFFGDDQNWNRGEINTTNQPQNRYSEPDNRDWRGRSANITSPGEDRSRDTIRDIHSGGRFDSRQQEANQFTRQDQLNNQFSKSGPATTLVKAEVPWSARRGNLSEKERVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGSDQLREEMRLMTAPEQELERRDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQALLGPDSNTCPAEENVEAICQFFNTIGKQMDESPKSRHINETYFIRLRDLTKNTQLAPRLRFMVRDVLDLRANNWIPRREEVKAKTINEIHSEAEKTLGLRPGATASIRNNRGIVSNPPGITSTGGFPIIRPGLGGMMPGMPGTRKMPGIPGLDNDSWEGQRTRSMPRGEGSPMQLAGRGPNPLVTKSSASSTRLLPQGSGGVLSGKTSALLQGSNPSPTRPSNIGFVSEPSAEALKPVFPLNTAPTSEQPRVHPSSVNLDYLRKKASSLLEEYFSIRILDEAAMCVEELKSPNYHPEVVKEAISMSLEKSPPCVEAVLKLIEFLFARKILSVRDVGTGCLLYASMLDDIAIDLPKAPHNFGEIMGKLVLFGGLDFKVVKEVLKKVEDDFFQKAILDAVLRTVYQSSSGKGVMDSQASDIEACRSLLS 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 25213730 25218813 - Bda034127 Bda09g00900 13150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00900 789 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 789 - -
Bda09g00900 789 MobiDBLite consensus disorder prediction 108 168 - -
Bda09g00900 789 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 789 IPR045208 GO:0003743
Bda09g00900 789 SMART ma3_7 624 736 IPR003891 -
Bda09g00900 789 MobiDBLite consensus disorder prediction 1 69 - -
Bda09g00900 789 Pfam MIF4G domain 210 435 IPR003890 GO:0003723|GO:0005515
Bda09g00900 789 Pfam MA3 domain 624 735 IPR003891 -
Bda09g00900 789 MobiDBLite consensus disorder prediction 500 589 - -
Bda09g00900 789 MobiDBLite consensus disorder prediction 145 160 - -
Bda09g00900 789 SUPERFAMILY ARM repeat 203 437 IPR016024 -
Bda09g00900 789 Gene3D - 201 436 - -
Bda09g00900 789 MobiDBLite consensus disorder prediction 543 588 - -
Bda09g00900 789 SMART if4_15 210 435 IPR003890 GO:0003723|GO:0005515
Bda09g00900 789 MobiDBLite consensus disorder prediction 24 41 - -
Bda09g00900 789 Gene3D - 618 781 - -
Bda09g00900 789 ProSiteProfiles MI domain profile. 623 745 IPR003891 -
Bda09g00900 789 SUPERFAMILY ARM repeat 621 776 IPR016024 -
Bda09g00900 789 MobiDBLite consensus disorder prediction 109 125 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00318 Bda09g00900 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00660 Bda-Chr1:33611765 Bda09g00900 Bda-Chr9:25213730 0 dispersed
Bda02g00318 Bda-Chr2:43037399 Bda09g00900 Bda-Chr9:25213730 0 dispersed
Bda03g00106 Bda-Chr3:956482 Bda09g00900 Bda-Chr9:25213730 0 dispersed
Bda03g01150 Bda-Chr3:12439423 Bda09g00900 Bda-Chr9:25213730 3.82E-07 dispersed
Bda09g00900 Bda-Chr9:25213730 Bda14g00779 Bda-Chr14:5981005 9.04E-06 dispersed
Bda02g00311 Bda-Chr2:42762270 Bda09g00900 Bda-Chr9:25213730 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00900 K03260 - tcc:18589002 1109.36