Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00902 ATGGCGGAAGGGAAAGCAATCGGGATTGACCTTGGGACTACGTACAGCTGTGTCGGCGTATGGAAAAACGACCGTGTCGAGATCATACCCAATGATCAAGGAAACCGGACTACTCCTTCCTACGTCGCGTTCACTGACACAGAGAGACTGATCGGCGATGCGGCGAAGAATCAGGTGGCTATGAACCCTCAGAACACGGTCTTCGACGCAAAGCGCCTGATTGGCAGGAGGTTTTCTGATCCCTCCGTTCAGAGCGATATGAAGCTCTGGCCTTTTAAAGTCATTCCCGGCCCCGGTGACAAACCGATGATCGTCGTCACGTACAAAGGAGACAGTAAGCAGTTCTCTCCAGAAGAAATTTCATCTATGGTGCTTATCAAAATGAGGGAAATAGCAGAGGCGTTCCTCAGTCAGCCGATAAAGCACGCCGTAATAACAGTTCCGGCGTATTTCAACGATTCCCAGAGGCAAGCCACTAAAGACGCCGGAGTCATTGCCGGTCTCAACGTCATGAGAATGATCAATGAACCAACGGCTGCCGCCATAGCTTACGGATTGGATAAGAAAGCGTCGAGAAAATGCGAACAGAACATCCTCATCTTTGATCTCGGCGGCGGTACCTTTGACGTCTCTTTGCTGTCGATCGAAGAAGGAATTTTCGAGGTCAAAGCGACCGCCGGAGACACTCATCTCGGTGGTGAAGATTTTGACAATCGGATGGTGAACCATTTCGTTGCAGAGTTCAAACGAAAGAACAAGAAAGATATCAGCGGCAACGCTAGAGCTTTGCGAAGGCTGAGAACTGCTTGCGAAAGAGCGAAAAGAACTTTGTCTTCAACCTCGCAAACGACTATCGAAATCGATTCTTTGTACGAAGGAATTGATTTCTACGCCACCATAACCAGAGCTCGATTCGAGGAATTGAACATGGATCTCTTCAGAAAATGCATGGAGCCCGTGGAAAAATGTATTCGTGATTCGAAAATCGATAAAAGTCAGGTCGATGAAGTAGTTTTGGTTGGAGGGTCGACGAGAATTCCGAAAGTTCAGCAACTTTTGCAGGATTATTTCAATGGAAAGGAGCTCTGCAAGAGCATCAATCCAGACGAAGCAGTCGCATATGGAGCCGCAGTTCAAGCCGCAATTTTAAGTGGTGAAGCTGATGAGAAGGTGCAGGATCTGCTGCTTCTCGACGTCACGCCTCTCAGTTTAGGTCTCGAGACGGCCGGCGGAGTTATGACGGTGCTTATTCCGAGAAACACTACGATTCCGACTAAGAAGGAGCAGATTTTCTCCACTTACTCAGACAATCAACCAGGAGTTCTAATCCAGGTTTACGAAGGAGAACGAGCCCGGACTAAAGATAACAATCTGCTCGGAAAGTTTGAGCTCACCGGCATTCCTCCAGCTCCGAGAGGTGTACCACAGATCAATGTTGTCTTCGACATTGATGCCAACGGAATACTAAATGTAACGGCGGAGGACAAGACCGCCGGAGTAAAGAATAGAATCACAATCACAAACGACAAAGGAAGACTGAGCAACGGAGGAGATAGAGAAAATGGTGCAAGACGCAGAGAAATACAAAGCAGAAGACGACATCGTGAAGAGGAAGGTGGAGGCGAAGAATGCGTTAGAGAACTACGCCTACAACATGAGGAACACGGTGAGGGACGAGAAATTTGCCGGAAAATTAAACGGAGAAGACAAAGGGAAAATCGACAAGGCAGTGGAGGAGGCCATAGAGTGGCTGGAGAGGAACCAGTTAGCGGAGGTTGA 1779 48.34 MAEGKAIGIDLGTTYSCVGVWKNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVTYKGDSKQFSPEEISSMVLIKMREIAEAFLSQPIKHAVITVPAYFNDSQRQATKDAGVIAGLNVMRMINEPTAAAIAYGLDKKASRKCEQNILIFDLGGGTFDVSLLSIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVAEFKRKNKKDISGNARALRRLRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCIRDSKIDKSQVDEVVLVGGSTRIPKVQQLLQDYFNGKELCKSINPDEAVAYGAAVQAAILSGEADEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVVFDIDANGILNVTAEDKTAGVKNRITITNDKGRLSNGGDRENGARRREIQSRRRHREEEGGGEECVRELRLQHEEHGEGREICRKIKRRRQRENRQGSGGGHRVAGEEPVSGG 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 25240003 25241781 - Bda031744.1 Bda09g00902 13152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00902 592 SUPERFAMILY Actin-like ATPase domain 5 188 IPR043129 -
Bda09g00902 592 Gene3D - 189 363 - -
Bda09g00902 592 PANTHER HEAT SHOCK PROTEIN 70KDA 2 515 IPR013126 GO:0005524|GO:0140662
Bda09g00902 592 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Bda09g00902 592 MobiDBLite consensus disorder prediction 513 563 - -
Bda09g00902 592 ProSitePatterns Heat shock hsp70 proteins family signature 2. 200 213 IPR018181 -
Bda09g00902 592 MobiDBLite consensus disorder prediction 508 592 - -
Bda09g00902 592 Gene3D - 68 123 - -
Bda09g00902 592 Gene3D Actin; Chain A, domain 4 232 315 - -
Bda09g00902 592 ProSitePatterns Heat shock hsp70 proteins family signature 3. 337 351 IPR018181 -
Bda09g00902 592 SUPERFAMILY Actin-like ATPase domain 194 385 IPR043129 -
Bda09g00902 592 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 381 559 IPR029047 -
Bda09g00902 592 CDD HSPA1-2_6-8-like_NBD 6 384 - -
Bda09g00902 592 Pfam Hsp70 protein 6 554 IPR013126 GO:0005524|GO:0140662
Bda09g00902 592 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 2 515 - -
Bda09g00902 592 Gene3D - 7 380 - -
Bda09g00902 592 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 389 515 IPR029047 -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 366 386 - -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 206 216 - -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 334 350 - -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 33 45 - -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 393 412 - -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 55 63 - -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 143 163 - -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 474 490 - -
Bda09g00902 592 PRINTS 70kDa heat shock protein signature 5 18 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00776 Bda-Chr3:6509888 Bda09g00902 Bda-Chr9:25240003 0 dispersed
Bda05g00971 Bda-Chr5:58206516 Bda09g00902 Bda-Chr9:25240003 0 dispersed
Bda09g00902 Bda-Chr9:25240003 Bda15g00221 Bda-Chr15:4939002 0 dispersed
Bda11g00572 Bda-Chr11:5898803 Bda09g00902 Bda-Chr9:25240003 4.04E-88 dispersed
Bda09g00902 Bda-Chr9:25240003 Bda02g00813 Bda-Chr2:48756502 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00902 K03283 - qsu:112025119 947.577