Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00911 ATGGCTCTCCGGCTCTTTCTTCTCGTTCTCCTCTATTCCGCCATACTTTGCTTTTCATACGAGCCTCGAAACCCTGAAGTGGAGGCTCTGATAAGCATAAAAACTGCTTTGAATGATCCTCGTGGAGTTCTAACCAACTGGGACGAATTCTCTGTCGACCCTTGTAGCTGGACGATGATAACTTGCTCACCTGAGAATCTTGTGATTGGATTAGGAGCTCCGAGCCAGTCTTTGTCTGGAACTTTATCTTGGGCTATTGGAAATCTCACTAATCTTCGACAAGTGTTGTTGCAGAACAACAACATTTCAGGCACAATTCCCCCGGAATTAGGAGCTCTTCCCATGCTTCAGACGTTAGATCTTTCTAACAATAGGTTCTCTGGAGTAGTTCCTCAGACTTTGGGTCAGTTGAATGGTCTCCACTATCTGAGACTCAATAACAATAGCTTGTCTGGGCCTTTTCCCATGTCTTTAGCCAAGATTTCTCAGCTTGCTTTCTTGGATTTGTCGTTTAACAATCTCAGTGGTCCGGTGCCGAAATTTCCACTTAAAACATTCAATGTTGTGGGAAACCCATTGATTTGTGGAAGCAGCTCTGCTGAAAGTTGTTCTGGATTATCTACCCCTGTTCCTCTTTCATTTGCTCTATACTCATCATCTCCTGGAAGACAAACGACTAAAAAAATCGCAATTTCCCTTGGGATCAGTCTCAGCTGTGCATTTTTAGTTCTCATAGCTCTCGGAATTCTTTGGCGAAGAAAAAGGCTGAAAAACCAATCAATCCTGCTCATAAACGAAAACCAGGAAGTGGGGCTAATGAGCTTAGGCAACCTAAGAAACTTCACTTTCAAAGAACTCCTGTCGGCAACAGACCATTTCAGCTCCAAAAACATTCTTGGTGCTGGAGGATTTGGTAATGTATATAAAGGAAAGTTAAGCGATGGGATGATAGTGGCAGTGAAACGACTCAAAGATGTCACCGGAACAACAGGCGAATCCCAATTTCGGACGGAATTAGAGATGATCAGTCTGGCTGTCCATCGGAATTTGCTTCGCTTGATTGGCTACTGCGCCACTTCACATGAGAAGCTCTTGGTTTACCCTTACATGTCTAATGGCAGTGTGGCTGCTCGCCTTAGAGGAAAACCAGCATTAGATTGGAATACAAGGAAGAGAATAGCAATTGGAGCTGCTAGGGGATTGCTATATCTACATGAGCAATGTGATCCAAAGATAATTCATAGAGATGTGAAGGCTGCAAATGTTCTTCTCGACGATTTCTACGAAGCTGTGGTTGGCGATTTTGGCCTGGCAAAGCTGCTCAACCATGCTGATTCACACGTGACCACCGCCGTTCGTGGCACTGTCGGGCACATTGCACCGGAATACCTCTCCACCGGTCAGTCGTCTGAGAAAACCGATGTTTTTGGATTTGGAATTCTGTTGTTGGAGCTTATAACTGGTATGAGAGCTCTTGACTTTGGCAAAACAATTAATCAGAAAGGCGCTATGCTCGAGTGGGTGAAGAAGATACAACAGGAGAATAAAGTGGAGTTGGCGGTGGACAGAGAGCTGGGGAACAACTATGACAGGATAGAAGTTGTTGAAATGTTGCAAGTAGCTCTCCTTTGCACTCACTACCTTCCTGCTCATCGCCCTAAGATGTCTGAAGTGGTTCGAATGCTTGAAGGCGACGGCCTCGTCGAGAAATGGGCTGCCTCGAACAATCACTCCAATCCCAACATCAACCTCTTCCAAACCCAAAACACAAGCAAAAGCACACTTAGAACTTTGTCAGCAACTAAGCAGGACAGCGATGATCGCGATTGTTCAAGCATGTTCACTGCTGCTTTGGACGAAGACGATGATGATCGGTCAATGGATTCCTATCCCATGGAACTTTCGGGTCCCAGGTGA 1917 45.28 MALRLFLLVLLYSAILCFSYEPRNPEVEALISIKTALNDPRGVLTNWDEFSVDPCSWTMITCSPENLVIGLGAPSQSLSGTLSWAIGNLTNLRQVLLQNNNISGTIPPELGALPMLQTLDLSNNRFSGVVPQTLGQLNGLHYLRLNNNSLSGPFPMSLAKISQLAFLDLSFNNLSGPVPKFPLKTFNVVGNPLICGSSSAESCSGLSTPVPLSFALYSSSPGRQTTKKIAISLGISLSCAFLVLIALGILWRRKRLKNQSILLINENQEVGLMSLGNLRNFTFKELLSATDHFSSKNILGAGGFGNVYKGKLSDGMIVAVKRLKDVTGTTGESQFRTELEMISLAVHRNLLRLIGYCATSHEKLLVYPYMSNGSVAARLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFYEAVVGDFGLAKLLNHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALDFGKTINQKGAMLEWVKKIQQENKVELAVDRELGNNYDRIEVVEMLQVALLCTHYLPAHRPKMSEVVRMLEGDGLVEKWAASNNHSNPNINLFQTQNTSKSTLRTLSATKQDSDDRDCSSMFTAALDEDDDDRSMDSYPMELSGPR 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 25761206 25764899 + Bda031755.1 Bda09g00911 13161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00911 638 MobiDBLite consensus disorder prediction 598 638 - -
Bda09g00911 638 Gene3D Phosphorylase Kinase; domain 1 263 369 - -
Bda09g00911 638 SMART serkin_6 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00911 638 Pfam Protein kinase domain 294 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00911 638 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 638 - -
Bda09g00911 638 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Bda09g00911 638 PRINTS Leucine-rich repeat signature 116 129 - -
Bda09g00911 638 PRINTS Leucine-rich repeat signature 161 174 - -
Bda09g00911 638 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Bda09g00911 638 ProSiteProfiles Protein kinase domain profile. 293 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00911 638 MobiDBLite consensus disorder prediction 601 620 - -
Bda09g00911 638 Gene3D Transferase(Phosphotransferase) domain 1 370 581 - -
Bda09g00911 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Bda09g00911 638 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Bda09g00911 638 SUPERFAMILY Protein kinase-like (PK-like) 273 563 IPR011009 -
Bda09g00911 638 Gene3D Ribonuclease Inhibitor 23 205 IPR032675 -
Bda09g00911 638 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 638 - -
Bda09g00911 638 SUPERFAMILY L domain-like 24 191 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02111 Bda-Chr1:57168550 Bda09g00911 Bda-Chr9:25761206 0 dispersed
Bda07g01052 Bda-Chr7:12392324 Bda09g00911 Bda-Chr9:25761206 0 dispersed
Bda09g00911 Bda-Chr9:25761206 Bda13g00252 Bda-Chr13:3193202 2.69E-165 dispersed
Bda14g00180 Bda-Chr14:1269565 Bda09g00911 Bda-Chr9:25761206 5.37E-40 dispersed
Bda15g00312 Bda-Chr15:5958760 Bda09g00911 Bda-Chr9:25761206 1.38E-46 dispersed
Bda09g00911 Bda-Chr9:25761206 Bda03g00411 Bda-Chr3:3543626 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69808 PF00069 Pkinase 3.50E-42 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00911 - - csv:101218629 1013.06