Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00946 ATGGGTTTCGTCCAGAATATCGGGAAGTACCAGCTAGGTCGGACGATTGGGGAGGGGAGTTTCGCGAAGGTGAAGCTCGCAGTGGATAGCACTAATGGGCACCGGGTTGCGATAAAGATCATTGATAAACACATGGTTATGGAAAGCAATCTCAAATCTCAGGTTCAGAGAGAGATAAGAACAATGAAGCTTCTGCATCATCCCAACATCGTTAGAATCCACGAGGTTATTGGTTCGAAATCAAAGATTTACCTCGTCATGGAATATGTTTGTGGAGGACAACTTTCAGACAGGATGTCATTTTACGAGAAACTGGGGGAAGATGAAGCGCGGAAGATCTTCCAGCAGCTGATTGATGCAGTAGATTATTGCCATAATAAAGGAATATATCACAGAGATCTTAAGCCAGAAAACTTGCTGCTGGATCAGAAGGGCAATCTCAAGATCTCGGATTTTGGACTTAGCGCATTTAAGAAGCCTGGTGACTTGCTAACTACAGCATGTGGCTCTCCCAGCTATGTGGCACCAGAGCTGCTCGTAAATCGCGGCTATGATGGGGCGGCTGCAGATGTTTGGTCGTGTGGCGTAGTTCTTTTCGAGATGCTTGCCGGCTCCTTGCCGTTTGAGGAGCGCAACTTGATGAACTTGTACAAGAAGATATCTAGAGCAGAATATACATTTCCAAACTGGATTTCAGAAGGAGCAACAAACCTGATCTCCAAAATTCTTGAGCCTGATCCAAGAAAGAGAATTACAATCTGCGAAATAATGGAGGATCCATGGTTTCAAGAAAATTACGTCGCTAATTACGGATACGAAAGCGAAGAGAAGATCTATTTGGATGATGTTAATGCTGCATTTGATTCTATTGATGAGAATGTTGTCGAGCCGAAGATCCCAAAATCGCCGAGTTTTATAAATGCTTTTCGACTGATAGCTATGTCGAGCGATCTTGATTTGTCAGGTCTTTTTGAAGGACAGGAAGAACACAAACAAAAAGTGAGATTTGGATCGAAGCTTAACATCAAAGAAACAATTGAAAAAATCGAAGCTGCTGCGACAGACTCGAGCTTATCGGTTGAAAAAATAAACAACTTCAGGATGAAAATTCATCGAAAACAAAAGATGACCAGATGTTCTAGATCACATTTAGATCTATCAGCAGAGGTGATTGAGGTTTCTCCGACTGATTGTGTCATCGAAGTATCAAAATCTGCCGGAGAACTCGTAACCTACAACAAATTCTGCAGAAGTTTAGCGAGTCTTTTGACAGAGAAGCCAAATTCTTCGCCCGATCTTCAACCTTCGGACAAAATCTCCGTCCTGCACGAAATCGAATGGTAA 1344 42.71 MGFVQNIGKYQLGRTIGEGSFAKVKLAVDSTNGHRVAIKIIDKHMVMESNLKSQVQREIRTMKLLHHPNIVRIHEVIGSKSKIYLVMEYVCGGQLSDRMSFYEKLGEDEARKIFQQLIDAVDYCHNKGIYHRDLKPENLLLDQKGNLKISDFGLSAFKKPGDLLTTACGSPSYVAPELLVNRGYDGAAADVWSCGVVLFEMLAGSLPFEERNLMNLYKKISRAEYTFPNWISEGATNLISKILEPDPRKRITICEIMEDPWFQENYVANYGYESEEKIYLDDVNAAFDSIDENVVEPKIPKSPSFINAFRLIAMSSDLDLSGLFEGQEEHKQKVRFGSKLNIKETIEKIEAAATDSSLSVEKINNFRMKIHRKQKMTRCSRSHLDLSAEVIEVSPTDCVIEVSKSAGELVTYNKFCRSLASLLTEKPNSSPDLQPSDKISVLHEIEW 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37511459 37513992 + Bda031915.1 Bda09g00946 13196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00946 447 PANTHER SERINE/THREONINE KINASE 6 432 - -
Bda09g00946 447 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00946 447 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00946 447 Pfam NAF domain 303 362 IPR004041 GO:0007165
Bda09g00946 447 CDD CIPK_C 307 419 - -
Bda09g00946 447 SUPERFAMILY Protein kinase-like (PK-like) 7 305 IPR011009 -
Bda09g00946 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bda09g00946 447 Gene3D Kinase associated domain 1, KA1 304 425 - -
Bda09g00946 447 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g00946 447 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Bda09g00946 447 Gene3D Transferase(Phosphotransferase) domain 1 3 303 - -
Bda09g00946 447 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Bda09g00946 447 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00764 Bda-Chr2:48393096 Bda09g00946 Bda-Chr9:37511459 1.14E-39 dispersed
Bda09g00946 Bda-Chr9:37511459 Bda07g00803 Bda-Chr7:9522295 8.46E-145 dispersed
Bda09g01465 Bda-Chr9:46458495 Bda09g00946 Bda-Chr9:37511459 9.31E-42 dispersed
Bda13g00160 Bda-Chr13:2081596 Bda09g00946 Bda-Chr9:37511459 7.77E-34 transposed
Bda13g01320 Bda-Chr13:35437249 Bda09g00946 Bda-Chr9:37511459 1.54E-50 transposed
Bda02g00137 Bda-Chr2:19715219 Bda09g00946 Bda-Chr9:37511459 2.10E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69809 PF00069 Pkinase 9.10E-77 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00946 - - fve:101302058 646.736