Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g00946 | ATGGGTTTCGTCCAGAATATCGGGAAGTACCAGCTAGGTCGGACGATTGGGGAGGGGAGTTTCGCGAAGGTGAAGCTCGCAGTGGATAGCACTAATGGGCACCGGGTTGCGATAAAGATCATTGATAAACACATGGTTATGGAAAGCAATCTCAAATCTCAGGTTCAGAGAGAGATAAGAACAATGAAGCTTCTGCATCATCCCAACATCGTTAGAATCCACGAGGTTATTGGTTCGAAATCAAAGATTTACCTCGTCATGGAATATGTTTGTGGAGGACAACTTTCAGACAGGATGTCATTTTACGAGAAACTGGGGGAAGATGAAGCGCGGAAGATCTTCCAGCAGCTGATTGATGCAGTAGATTATTGCCATAATAAAGGAATATATCACAGAGATCTTAAGCCAGAAAACTTGCTGCTGGATCAGAAGGGCAATCTCAAGATCTCGGATTTTGGACTTAGCGCATTTAAGAAGCCTGGTGACTTGCTAACTACAGCATGTGGCTCTCCCAGCTATGTGGCACCAGAGCTGCTCGTAAATCGCGGCTATGATGGGGCGGCTGCAGATGTTTGGTCGTGTGGCGTAGTTCTTTTCGAGATGCTTGCCGGCTCCTTGCCGTTTGAGGAGCGCAACTTGATGAACTTGTACAAGAAGATATCTAGAGCAGAATATACATTTCCAAACTGGATTTCAGAAGGAGCAACAAACCTGATCTCCAAAATTCTTGAGCCTGATCCAAGAAAGAGAATTACAATCTGCGAAATAATGGAGGATCCATGGTTTCAAGAAAATTACGTCGCTAATTACGGATACGAAAGCGAAGAGAAGATCTATTTGGATGATGTTAATGCTGCATTTGATTCTATTGATGAGAATGTTGTCGAGCCGAAGATCCCAAAATCGCCGAGTTTTATAAATGCTTTTCGACTGATAGCTATGTCGAGCGATCTTGATTTGTCAGGTCTTTTTGAAGGACAGGAAGAACACAAACAAAAAGTGAGATTTGGATCGAAGCTTAACATCAAAGAAACAATTGAAAAAATCGAAGCTGCTGCGACAGACTCGAGCTTATCGGTTGAAAAAATAAACAACTTCAGGATGAAAATTCATCGAAAACAAAAGATGACCAGATGTTCTAGATCACATTTAGATCTATCAGCAGAGGTGATTGAGGTTTCTCCGACTGATTGTGTCATCGAAGTATCAAAATCTGCCGGAGAACTCGTAACCTACAACAAATTCTGCAGAAGTTTAGCGAGTCTTTTGACAGAGAAGCCAAATTCTTCGCCCGATCTTCAACCTTCGGACAAAATCTCCGTCCTGCACGAAATCGAATGGTAA | 1344 | 42.71 | MGFVQNIGKYQLGRTIGEGSFAKVKLAVDSTNGHRVAIKIIDKHMVMESNLKSQVQREIRTMKLLHHPNIVRIHEVIGSKSKIYLVMEYVCGGQLSDRMSFYEKLGEDEARKIFQQLIDAVDYCHNKGIYHRDLKPENLLLDQKGNLKISDFGLSAFKKPGDLLTTACGSPSYVAPELLVNRGYDGAAADVWSCGVVLFEMLAGSLPFEERNLMNLYKKISRAEYTFPNWISEGATNLISKILEPDPRKRITICEIMEDPWFQENYVANYGYESEEKIYLDDVNAAFDSIDENVVEPKIPKSPSFINAFRLIAMSSDLDLSGLFEGQEEHKQKVRFGSKLNIKETIEKIEAAATDSSLSVEKINNFRMKIHRKQKMTRCSRSHLDLSAEVIEVSPTDCVIEVSKSAGELVTYNKFCRSLASLLTEKPNSSPDLQPSDKISVLHEIEW | 447 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37511459 | 37513992 | + | Bda031915.1 | Bda09g00946 | 13196 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g00946 | 447 | PANTHER | SERINE/THREONINE KINASE | 6 | 432 | - | - | |
Bda09g00946 | 447 | ProSiteProfiles | Protein kinase domain profile. | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00946 | 447 | Pfam | Protein kinase domain | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00946 | 447 | Pfam | NAF domain | 303 | 362 | IPR004041 | GO:0007165 | |
Bda09g00946 | 447 | CDD | CIPK_C | 307 | 419 | - | - | |
Bda09g00946 | 447 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 305 | IPR011009 | - | |
Bda09g00946 | 447 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
Bda09g00946 | 447 | Gene3D | Kinase associated domain 1, KA1 | 304 | 425 | - | - | |
Bda09g00946 | 447 | SMART | serkin_6 | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g00946 | 447 | ProSitePatterns | Protein kinases ATP-binding region signature. | 16 | 39 | IPR017441 | GO:0005524 | |
Bda09g00946 | 447 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 303 | - | - | |
Bda09g00946 | 447 | ProSiteProfiles | NAF domain profile. | 301 | 325 | IPR018451 | GO:0007165 | |
Bda09g00946 | 447 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED | 6 | 432 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00764 | Bda-Chr2:48393096 | Bda09g00946 | Bda-Chr9:37511459 | 1.14E-39 | dispersed | |
Bda09g00946 | Bda-Chr9:37511459 | Bda07g00803 | Bda-Chr7:9522295 | 8.46E-145 | dispersed | |
Bda09g01465 | Bda-Chr9:46458495 | Bda09g00946 | Bda-Chr9:37511459 | 9.31E-42 | dispersed | |
Bda13g00160 | Bda-Chr13:2081596 | Bda09g00946 | Bda-Chr9:37511459 | 7.77E-34 | transposed | |
Bda13g01320 | Bda-Chr13:35437249 | Bda09g00946 | Bda-Chr9:37511459 | 1.54E-50 | transposed | |
Bda02g00137 | Bda-Chr2:19715219 | Bda09g00946 | Bda-Chr9:37511459 | 2.10E-139 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69809 | PF00069 | Pkinase | 9.10E-77 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g00946 | - | - | fve:101302058 | 646.736 |