Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00970 GAAAAAGTTCCGATAGAGGAAGTGTTTGAACAGTTGAAATGCTCTCGAGAAGGTCTGACATCGGTGGAGGGCGAAGCCCGGTTGCAGATTTTCGGACCCAACAAATTAGAAGAGAAAAAGGAGAGCAAGATTCTGAAGTTTTTAGGGTTTATGTGGAATCCCCTATCATGGGTGATGGAAGCTGCTGCGATTATGGCAATCGCCCTTGCAAATGGCGGAGGAAAGCCTCCGGATTGGCAGGATTTCGTGGGTATTATTTGTTTGTTGGTGATTAATTCCACCATTAGTTTTATTGAAGAAAATAATGCTGGAAATGCCGCTGCTGCTCTTATGGCTGGTCTAGCCCCAAAAACCAAGGTTCTTCGAGATGGTCAATGGAGTGAGCAAGATGCTGCAATTCTTGTTCCTGGAGACATTGTCAGCATTAAGCTCGGAGACATTATTCCTGCTGATGCCCGTTTACTCGAGGGCGATCCGTTAAAAGTTGACCAATCGGCTCTCACAGGAGAATCACTTCCAGTCACAAAACACCCGGGAGATGAAATTTTCTCCGGTTCGACATGCAAACAAGGAGAAATCGAAGCGGTTGTAATTGCAACTGGAGTTCACACCTTCTTCGGAAAGGCAGCTCATCTTGTGGACAGTACAAACCAAGTTGGACATTTCCAAAAGGTTCTCACAGCCATTGGAAATTTCTGTATATGTTCCATTGCAGTTGGAATGCTAATAGAAATCATCGTCATGTACCCAATTCAAAAACGAAAATATAGAGATGGAATTGACAATCTTCTTGTTCTCTTGATTGGAGGAATACCAATTGCCATGCCAACAGTTTTATCTGTGACAATGGCTATTGGGTCCCATAAGCTGTCCCAACAAGGTGCCATTACGAAGCGTATGACTGCCATTGAAGAAATGGCAGGAATGGATGTCCTCTGCAGTGACAAAACTGGCACTCTAACTCTCAACAAGCTTAGTGTTGACAAAAACTTGGTTGAGGTATTTGCTGATGGGGTAGATAAAGACCATGTTATTTTGCTTGCTGCAAGGGCTTCTAGAACTGAAAACCAGGACGCAATAGATACTGCCATGGTCGGAATGTTAGCTGACCCAAAGGAGGCACGAGCTGGTATTAGGGAAGTTCACTTCTTTCCCTTTAATCCTGTGGACAAGAGAACTGCCTTAACTTATATTGATTCAGATGGAAGCTGGCACAGAGCTAGCAAAGGAGCTCCTGAGCAAATATTGAATCTTTGCAACTGCAAAGAGGATGTGAAAAGGAAGGTTCATGGAGTCATAGATAAATATGCTGAACGTGGACTTCGCTCCTTGGCTGTTGCGAGACAGGAAGTGCCTGAGAAGAGCAAAGAAAGCCCTGGTGGACCATGGCAGTTGGTTGGTTTATTGTCGCTTTTTGATCCTCCTAGACATGATAGTGCGGAAACAATCCGTAGAGCTCTCAATTTGGGTGTGAATGTGAAGATGATCACTGGCGATCAACTTGCTATTGCTAAGGAAACTGGCCGAAGACTCGGAATGGGGACGAACATGTACCCATCAGCTTCCTTACTAGGACAGCACAAGGATGAAAGCATTGCTGGCCTTCCAGTAGAAGAGTTAATTGAAAAGGCAGATGGGTTTGCTGGAGTTTTTCCTGGTAACTTGGCCTGTTTTCCCACTCTGTATATGAAATTAACTCATAATCTCTTTTTCTTAGAGCACAAGTATGAAATAGTGAAGAAATTGCAAGAGAGGAAGCACATTTGCGGAATGACAGGAGATGGTGTAAACGACGCACCCGCTTTAAAGAAGGCAGATATTGGAATTGCAGTGGCAGATGCCACTGATGCTGCACGAGGGGCTTCCGACATTGTTCTTACTGAACCTGGCCTCAGTGTCATCATTAGTGCAGTGCTTACTAGCAGAGCTATTTTTCAGAGAATGAAAAACTATACAATTTATGCCGTTTCTATCACCATTCGTATTGTGTTTGGTTTCATGCTTATTGCGTTAATATGGAAATTCGACTTCTCTCCGTTCATGGTTTTGATTATCGCCATTTTGAACGACGGTACGATTATGACAATTTCAAAGGATAGAGTGAAGCCATCTCCAATGCCTGATAGTTGGAAACTTAAAGAGATATTCGCTACTGGGGTCGTGCTCGGAGGTTACCTGGCTATAATGACTGTGGTGTTCTTCTGGTTAATGAGGGACACAGATTTTTTCACTGAAAAATTTGGTGTGAGGTCTATCAGGAATAGTGATGAAGAAATGATGGCTGCTCTATACTTACAAGTGAGTATTGTAAGCCAGGCGCTGATATTTGTCACCAGGTCACGAAGCTGGTCGTATATCGAACGTCCAGGCATGCTGCTTATGAGCGCTTTTCTGATTGCACAACTGATCGCAACTGTCATAGCAGTTTACGCCCACTGGGGTTTCGCTAGGATAAAGGGTTGTGGATGGGGATGGGCAGGTGTCATTTGGATATATAGTCTCGTTTTTTATGTCCCGCTCGATGTAATGAAGTTTGCGATCCGCTATATCTTAAGTGGAAAGGCTTGGCTTAACATGCTGGAGAACAAGACTGCCTTCACAACTAAGAAGAATTATGGAAGAGAAGAAAGAGAAGCACAATGGGCTCTGGCTCAAAGAACTCTCCATGGACTCCAACCTCCAGAATCGAGTAATGTTTTCTCCGAAAGGAGCAATTACAGAGACCTATCGGAGATCGCCGAGCAGGCAAAGAGACGAGCCGAAGTTGCAAGGCTCCGGGAGCTTCTTACGCTAAAGGGCCACGTAGAATCGGTCGTGAAGCTGAAAGGACTCGATATCAACACAATTCAGCAACATTATACAGTGTGA 2868 44.28 EKVPIEEVFEQLKCSREGLTSVEGEARLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGQWSEQDAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHPGDEIFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLIEIIVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFADGVDKDHVILLAARASRTENQDAIDTAMVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGSWHRASKGAPEQILNLCNCKEDVKRKVHGVIDKYAERGLRSLAVARQEVPEKSKESPGGPWQLVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPVEELIEKADGFAGVFPGNLACFPTLYMKLTHNLFFLEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGYLAIMTVVFFWLMRDTDFFTEKFGVRSIRNSDEEMMAALYLQVSIVSQALIFVTRSRSWSYIERPGMLLMSAFLIAQLIATVIAVYAHWGFARIKGCGWGWAGVIWIYSLVFYVPLDVMKFAIRYILSGKAWLNMLENKTAFTTKKNYGREEREAQWALAQRTLHGLQPPESSNVFSERSNYRDLSEIAEQAKRRAEVARLRELLTLKGHVESVVKLKGLDINTIQQHYTV 955
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38857369 38862580 + Bda031951.1 Bda09g00970 13220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00970 955 PRINTS P-type cation-transporting ATPase superfamily signature 489 499 - -
Bda09g00970 955 PRINTS P-type cation-transporting ATPase superfamily signature 163 177 - -
Bda09g00970 955 PRINTS P-type cation-transporting ATPase superfamily signature 592 611 - -
Bda09g00970 955 PRINTS P-type cation-transporting ATPase superfamily signature 313 327 - -
Bda09g00970 955 PRINTS P-type cation-transporting ATPase superfamily signature 467 478 - -
Bda09g00970 955 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Bda09g00970 955 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Bda09g00970 955 CDD P-type_ATPase_H 18 845 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda09g00970 955 PANTHER CALCIUM-TRANSPORTING ATPASE 1 935 - -
Bda09g00970 955 Coils Coil 906 926 - -
Bda09g00970 955 SFLD Haloacid Dehalogenase 295 643 - -
Bda09g00970 955 Pfam Cation transporter/ATPase, N-terminus 2 65 IPR004014 -
Bda09g00970 955 Pfam haloacid dehalogenase-like hydrolase 309 515 - -
Bda09g00970 955 Gene3D - 325 472 IPR023299 GO:0000166
Bda09g00970 955 PRINTS H+-transporting ATPase (proton pump) signature 544 560 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda09g00970 955 PRINTS H+-transporting ATPase (proton pump) signature 429 447 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda09g00970 955 PRINTS H+-transporting ATPase (proton pump) signature 764 785 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda09g00970 955 SUPERFAMILY HAD-like 309 639 IPR036412 -
Bda09g00970 955 SUPERFAMILY Calcium ATPase, transduction domain A 116 213 IPR008250 -
Bda09g00970 955 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 85 520 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda09g00970 955 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 573 680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda09g00970 955 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 851 IPR023298 -
Bda09g00970 955 Gene3D - 904 955 - -
Bda09g00970 955 SFLD p-type atpase 295 643 IPR044492 -
Bda09g00970 955 ProSitePatterns E1-E2 ATPases phosphorylation site. 315 321 IPR018303 -
Bda09g00970 955 Pfam E1-E2 ATPase 115 292 - -
Bda09g00970 955 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 18 552 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda09g00970 955 PANTHER PLASMA MEMBRANE ATPASE 1 935 - -
Bda09g00970 955 Gene3D - 180 317 - -
Bda09g00970 955 Gene3D - 591 850 - -
Bda09g00970 955 Gene3D - 50 128 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00275 Bda09g00970 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00039 Bda-Chr3:511302 Bda09g00970 Bda-Chr9:38857369 0 dispersed
Bda09g00970 Bda-Chr9:38857369 Bda13g01294 Bda-Chr13:35220963 0 dispersed
Bda11g00095 Bda-Chr11:1127918 Bda09g00970 Bda-Chr9:38857369 0 transposed
Bda13g01304 Bda-Chr13:35257673 Bda09g00970 Bda-Chr9:38857369 0 transposed
Bda02g00275 Bda-Chr2:41226892 Bda09g00970 Bda-Chr9:38857369 5.38E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00970 K01535 - jre:108980431 1662.12