Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01013 ATGTTGGAGGGCAATCCTAAATTCACGGGAATTATTGATCTAAACAACCACGACTATGATTTCTCACAAGGGTTTTATCATAAACTGGACGAGGATACCAACATGTCAATTGATAGTTCTGGAAGCTTGCACGCTAGCAATGGTGGAGGGTCTGTCGCAATGTCTGTAGATAATAACAGTAGTGTTGCATCAAATGAATCCCATACTCGTATTTTGAACCACCCGGGTCTTCGGCGGCGAGCCAATGACAATTACACTGTGCAACAGAGTACTCATAAGGGAAGAGTGACACATGCTTTAAGCGATGATGCACTTGCCCGGGCTCTATTTGACAGTAGCACCCCTACTCAAGGACTTGAAAGTTTTGAGGAGTGGACAATCGATTTGAGAAAACTTAATATGGGGGAAGCTTTTGCACAAGGAGCTTTTGGAAAACTTTATCGAGGTACTTACAATGGTGAAGATGTTGCTATCAAAATCTTGGAGAGGCCAGATAATGATAATGACAAGGCTCTGTTGATGGAGCAACAGTTTCAGCAGGAGGTCATCATGTTGGCTACGTTGAAGCATCCAAATATAGTACGTTTTATTGGTGGCTGTAGCAAGCCAATGCTTTGGTGCATTGTGACTGAATACGCAAAAGGTGGTTCAGTTCGGCAATTCTTAATGAAGCGGCAAAGTCGATCGGTTCCTCTTAAGCTGGCAGTCAAGCAAGCTTTAGATGTGGCAAGGGGGATGGCATATGTTCATGAGCTTGGACTAATACATCGGGACTTAAAGTCTGACAACTTGTTGATTTCTGCAGATAAATCTATAAAAATTGCTGACTTTGGAGTAGCACGAATTGAGGTGCAGACTGAAGGAATGACGCCTGAGACTGGCACATACCGCTGGATGGCTCCGGAGATGATCCAGCACAGGCCCTACACACAAAAAGTAGATGTGTATAGCTTTGGGATTGTTCTTTGGGAACTCATAACCGGAATGCTTCCATTCCAAAATATGACGGCTGTACAGGCTGCATTTGCAGTTGTGAACAAGGGTTTTCGTCCTGTCATCCCAAACGATTGCTTGCCTGTTCTCAGCGAGATAATGACGCGCTGCTGGGATGCCAATCCAAATGTTAGACCCCACTTCACTGAGGTGGTCAGAATGCTGGAGCATGCCCAAACTGAGATCATGACAAGCATCCGAAAGGCTCGTTTTAGGTGTTGCATTGCTGAGCCTGTAACTGCCGACTGA 1242 45.01 MLEGNPKFTGIIDLNNHDYDFSQGFYHKLDEDTNMSIDSSGSLHASNGGGSVAMSVDNNSSVASNESHTRILNHPGLRRRANDNYTVQQSTHKGRVTHALSDDALARALFDSSTPTQGLESFEEWTIDLRKLNMGEAFAQGAFGKLYRGTYNGEDVAIKILERPDNDNDKALLMEQQFQQEVIMLATLKHPNIVRFIGGCSKPMLWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMAYVHELGLIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGFRPVIPNDCLPVLSEIMTRCWDANPNVRPHFTEVVRMLEHAQTEIMTSIRKARFRCCIAEPVTAD 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40133049 40139546 - Bda032016.1 Bda09g01013 13263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01013 413 SUPERFAMILY Protein kinase-like (PK-like) 114 386 IPR011009 -
Bda09g01013 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672|GO:0006468
Bda09g01013 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672|GO:0006468
Bda09g01013 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
Bda09g01013 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Bda09g01013 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672|GO:0006468
Bda09g01013 413 ProSiteProfiles Protein kinase domain profile. 132 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01013 413 Gene3D Transferase(Phosphotransferase) domain 1 215 405 - -
Bda09g01013 413 PANTHER SERINE-THREONINE PROTEIN KINASE 2 403 - -
Bda09g01013 413 MobiDBLite consensus disorder prediction 40 71 - -
Bda09g01013 413 MobiDBLite consensus disorder prediction 40 81 - -
Bda09g01013 413 CDD STKc_MAP3K-like 139 386 - -
Bda09g01013 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bda09g01013 413 SMART serkin_6 132 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01013 413 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 403 - -
Bda09g01013 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672|GO:0006468
Bda09g01013 413 Gene3D Phosphorylase Kinase; domain 1 120 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01720 Bda-Chr1:53277260 Bda09g01013 Bda-Chr9:40133049 1.84E-100 dispersed
Bda05g00905 Bda-Chr5:57553100 Bda09g01013 Bda-Chr9:40133049 4.96E-77 dispersed
Bda09g01013 Bda-Chr9:40133049 Bda14g00817 Bda-Chr14:6283031 3.16E-100 dispersed
Bda13g00107 Bda-Chr13:1484747 Bda09g01013 Bda-Chr9:40133049 9.37E-47 dispersed
Bda13g01658 Bda-Chr13:40027030 Bda09g01013 Bda-Chr9:40133049 3.72E-73 dispersed
Bda14g00632 Bda-Chr14:4747419 Bda09g01013 Bda-Chr9:40133049 3.65E-84 dispersed
Bda14g01176 Bda-Chr14:11240606 Bda09g01013 Bda-Chr9:40133049 1.62E-76 dispersed
Bda02g00228 Bda-Chr2:38377088 Bda09g01013 Bda-Chr9:40133049 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69810 PF07714 PK_Tyr_Ser-Thr 8.80E-68 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01013 - - csv:101213713 716.842