Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda09g01017 | ATGAGTACTAGTCGATCCCGAGCCGGTTCTTCAGGATCGGGATTTTTAAGCAAGATCAAGACTTCCTGTGGTTTAAGTTCCACATCTGGAAACTCTGGAAAAGGTAGAAGTAGGTCATCAATTACAGGAGTGAGATATGGATTTCACTTGATTGAAGGGAAATCGGGTCATAATATGGAGGATTATCATGTTGCTGAATACAAAAGAAAGAAAAACCACGAGCTTGGATTGTTTGCCATATTCGACGGTCACCTTGGGGATCGAGTCCCATACTTTTTGAGTCAGCATCTCTTCAATAACATACTTGATGAGCCAAATTTCATGATAGACCAAAAGCAGGCAATCAGGAATGCGTATGACTCCACTAATAAGGTTATCTTGGAAAACTCCATGCAATTGGGTCCTGGTGGTTCTACTGCAGTAACTGCAATAGTCATTGATGGCAAAGACTTATGGGTAGCAAACATCGGTGACTCAAGAGCTGTTGTGTGTGAGAGGGGCTCTGCTAATCAACTAACAGTAGACCATGAACCACGCAGTGAACGACCAAGGATAGAAAAGCAAGGTGGCTTTGTGATAACCTTACCTGGAGATGTGCCTAGAGTCAATGGTCAACTAGCAGTTGCTCGGGCTTTTGGGGATCAAAATCTAAAAGAACATTTAAGTGCAGATCCCGACGTAAGACATGTTCCTATAGACTCAACGATTGAGTTTGTAATTTTGGCAAGTGACGGTTTGTGGAAGGTTATGAATAATCAAGAGGCAGTTGATCTGATCAAGGCCACCAAAGATCCTCAAGAAGCAGCGAAGCGATTAGCCAACGAGGCATTGAAGAGAAAAAGTAAAGACGATATATCATGCATTGTGATTCGGTTTGGATAA | 882 | 42.4 | MSTSRSRAGSSGSGFLSKIKTSCGLSSTSGNSGKGRSRSSITGVRYGFHLIEGKSGHNMEDYHVAEYKRKKNHELGLFAIFDGHLGDRVPYFLSQHLFNNILDEPNFMIDQKQAIRNAYDSTNKVILENSMQLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGSANQLTVDHEPRSERPRIEKQGGFVITLPGDVPRVNGQLAVARAFGDQNLKEHLSADPDVRHVPIDSTIEFVILASDGLWKVMNNQEAVDLIKATKDPQEAAKRLANEALKRKSKDDISCIVIRFG | 293 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 40189384 | 40191951 | - | Bda032021.1 | Bda09g01017 | 13267 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda09g01017 | 293 | PANTHER | PROTEIN PHOSPHATASE 2C | 11 | 293 | IPR015655 | GO:0004722|GO:0006470 | |
| Bda09g01017 | 293 | SMART | PP2C_4 | 41 | 290 | IPR001932 | - | |
| Bda09g01017 | 293 | ProSiteProfiles | PPM-type phosphatase domain profile. | 45 | 292 | IPR001932 | - | |
| Bda09g01017 | 293 | Pfam | Protein phosphatase 2C | 57 | 285 | IPR001932 | - | |
| Bda09g01017 | 293 | CDD | PP2Cc | 57 | 292 | IPR001932 | - | |
| Bda09g01017 | 293 | Gene3D | - | 39 | 293 | IPR036457 | - | |
| Bda09g01017 | 293 | PANTHER | PROTEIN PHOSPHATASE 2C 44-RELATED | 11 | 293 | - | - | |
| Bda09g01017 | 293 | SUPERFAMILY | PP2C-like | 36 | 293 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g00114 | Bda-Chr3:1021779 | Bda09g01017 | Bda-Chr9:40189384 | 1.43E-69 | dispersed | |
| Bda06g01107 | Bda-Chr6:39257393 | Bda09g01017 | Bda-Chr9:40189384 | 8.59E-110 | dispersed | |
| Bda07g00321 | Bda-Chr7:4251434 | Bda09g01017 | Bda-Chr9:40189384 | 7.89E-117 | dispersed | |
| Bda08g00372 | Bda-Chr8:3807556 | Bda09g01017 | Bda-Chr9:40189384 | 1.69E-33 | dispersed | |
| Bda08g00720 | Bda-Chr8:8097321 | Bda09g01017 | Bda-Chr9:40189384 | 1.54E-113 | dispersed | |
| Bda09g00516 | Bda-Chr9:6826972 | Bda09g01017 | Bda-Chr9:40189384 | 1.39E-112 | dispersed | |
| Bda09g01017 | Bda-Chr9:40189384 | Bda14g00766 | Bda-Chr14:5849543 | 4.47E-72 | dispersed | |
| Bda02g00223 | Bda-Chr2:38172919 | Bda09g01017 | Bda-Chr9:40189384 | 5.97E-138 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda09g01017 | K17506 | - | cpap:110811361 | 452.595 |