Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01017 ATGAGTACTAGTCGATCCCGAGCCGGTTCTTCAGGATCGGGATTTTTAAGCAAGATCAAGACTTCCTGTGGTTTAAGTTCCACATCTGGAAACTCTGGAAAAGGTAGAAGTAGGTCATCAATTACAGGAGTGAGATATGGATTTCACTTGATTGAAGGGAAATCGGGTCATAATATGGAGGATTATCATGTTGCTGAATACAAAAGAAAGAAAAACCACGAGCTTGGATTGTTTGCCATATTCGACGGTCACCTTGGGGATCGAGTCCCATACTTTTTGAGTCAGCATCTCTTCAATAACATACTTGATGAGCCAAATTTCATGATAGACCAAAAGCAGGCAATCAGGAATGCGTATGACTCCACTAATAAGGTTATCTTGGAAAACTCCATGCAATTGGGTCCTGGTGGTTCTACTGCAGTAACTGCAATAGTCATTGATGGCAAAGACTTATGGGTAGCAAACATCGGTGACTCAAGAGCTGTTGTGTGTGAGAGGGGCTCTGCTAATCAACTAACAGTAGACCATGAACCACGCAGTGAACGACCAAGGATAGAAAAGCAAGGTGGCTTTGTGATAACCTTACCTGGAGATGTGCCTAGAGTCAATGGTCAACTAGCAGTTGCTCGGGCTTTTGGGGATCAAAATCTAAAAGAACATTTAAGTGCAGATCCCGACGTAAGACATGTTCCTATAGACTCAACGATTGAGTTTGTAATTTTGGCAAGTGACGGTTTGTGGAAGGTTATGAATAATCAAGAGGCAGTTGATCTGATCAAGGCCACCAAAGATCCTCAAGAAGCAGCGAAGCGATTAGCCAACGAGGCATTGAAGAGAAAAAGTAAAGACGATATATCATGCATTGTGATTCGGTTTGGATAA 882 42.4 MSTSRSRAGSSGSGFLSKIKTSCGLSSTSGNSGKGRSRSSITGVRYGFHLIEGKSGHNMEDYHVAEYKRKKNHELGLFAIFDGHLGDRVPYFLSQHLFNNILDEPNFMIDQKQAIRNAYDSTNKVILENSMQLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGSANQLTVDHEPRSERPRIEKQGGFVITLPGDVPRVNGQLAVARAFGDQNLKEHLSADPDVRHVPIDSTIEFVILASDGLWKVMNNQEAVDLIKATKDPQEAAKRLANEALKRKSKDDISCIVIRFG 293
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 40189384 40191951 - Bda032021.1 Bda09g01017 13267
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01017 293 PANTHER PROTEIN PHOSPHATASE 2C 11 293 IPR015655 GO:0004722|GO:0006470
Bda09g01017 293 SMART PP2C_4 41 290 IPR001932 -
Bda09g01017 293 ProSiteProfiles PPM-type phosphatase domain profile. 45 292 IPR001932 -
Bda09g01017 293 Pfam Protein phosphatase 2C 57 285 IPR001932 -
Bda09g01017 293 CDD PP2Cc 57 292 IPR001932 -
Bda09g01017 293 Gene3D - 39 293 IPR036457 -
Bda09g01017 293 PANTHER PROTEIN PHOSPHATASE 2C 44-RELATED 11 293 - -
Bda09g01017 293 SUPERFAMILY PP2C-like 36 293 IPR036457 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00114 Bda-Chr3:1021779 Bda09g01017 Bda-Chr9:40189384 1.43E-69 dispersed
Bda06g01107 Bda-Chr6:39257393 Bda09g01017 Bda-Chr9:40189384 8.59E-110 dispersed
Bda07g00321 Bda-Chr7:4251434 Bda09g01017 Bda-Chr9:40189384 7.89E-117 dispersed
Bda08g00372 Bda-Chr8:3807556 Bda09g01017 Bda-Chr9:40189384 1.69E-33 dispersed
Bda08g00720 Bda-Chr8:8097321 Bda09g01017 Bda-Chr9:40189384 1.54E-113 dispersed
Bda09g00516 Bda-Chr9:6826972 Bda09g01017 Bda-Chr9:40189384 1.39E-112 dispersed
Bda09g01017 Bda-Chr9:40189384 Bda14g00766 Bda-Chr14:5849543 4.47E-72 dispersed
Bda02g00223 Bda-Chr2:38172919 Bda09g01017 Bda-Chr9:40189384 5.97E-138 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01017 K17506 - cpap:110811361 452.595