Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01040 ATGAATATTTACTGCGCCCACAAGGCTTCAACACTTATATTCTCTATAAAGGAAGGCTTACCCATTGGGAGTAAAGTAATTGGGAGAGCTTCCATGGCGGCAGATAAGCTTCTGACTGGAGAAAATATTGAGAAATGGCTCCCAATTTTCGACAGTAAACACAAGTCCCGCCATGGAAGTTCAAAACTCCACGTGAATATGCAGTTCTTTCATGTCAGCAAAGATGATAGCTGGTCAAGAGGAATACCCAGTCTCGATTTTGAAGGAGTCCCGTTTACTTTCTTTAGGCAGAGAAATGGCTGCAAAGTTACACTATATCAAGACGCTCACATCCCAAATGAGTTCACCCCCAGAATTTCTCTTGATGGAAACAAGACTTATGAGCCTAATAGGTGTTGGGAAGACGTGTTTGATGCTATTTCTAATGCTAAGCACTTGATTTATATTGTTGGATGGTCGGTCTACACTAAGATTGCGTTAATTCGCGACGTTAGTCGGGGAAAACCTGGCCGGGATGTGACGCTCGGAGAGCTTCTGGTGAAGAAGGCCAAGGAAGGAGTTAGGGTTCTAATGCTTGTGTGGGATGACAAAACTTCAGTGAAGTTGCTCAAGGAAGATGGAGTAATGGCTACCCATGATGAAGATACAGCAAAATACTTTCACAATTCAGGTGTTCATTGTGTTTTATGCCCTAGAAATCCAGATAATGGGAAGAGCTTAGTTCAAGGAGTGCAGATTTCCACCATGTTTACTCATCATCAGAAGACGATAGTTGTCGACAAAGCGAGTTCGGTTTCGCATGAAATATCGTCGGATAAACGAAGAATAGTGAGCTTTATTGGAGGAATTGATCTTTGTGATGGGAGATATGATACTCCATGTCACTCTATTTTCAGAACTCTTGGTTCGACCCATCATAATGATTATCATCAACCTTGTTTTTCGGCCGCGACGATCAAGAAAGGTGGTCCGAGAGAGCCATGGCATGACGTCCACTGTCGCTTGGAAGGGCCGATTGCATGGGATGTTCTGATCAATTTCGAGCAGAGATGGAGGAAACAGTGTGAAGGAAAGAAAGATTTGCTTGTTAAGGTTGAAGAGCTTGCCGAGATTTTCACACCCCCTTCGCCGGTTTCTTCGGTGAAAGATCCAGAAACTTGGAATGTCCAGCTTTTCCGGTCCATTGACGGCGGCTCTGTGATGGGGTTCCCATCGAATCCACTGGAGGCTGCGAAAGCTGGTCTTATAAACTCTGAGAATTCCACAGTTGAAAGAAGCATTCAAGATGCTTATATTCACGCCATTAGAAGAGCAAAACGCTTCATTTACATCGAAAACCAGTATTTCCTAGGAAGCTCACATAGCTGGACGAATCAAAACGGCAATGTCGGCGCCATTAACCTAATTCCCAAAGAACTTTCAATGAAGATCGTGAGCAAGATCTTAGCCGGAGAGAGATTCGCGGTATACATAGTTATTCCGATGTGGCCGGAGGGTGTGCCGGAAAGTGGATCAGTTCAGGCAATACTGAACTGGCAAAGGAAGACGATGGAAATGATGTATAGAGATGTAGCTGAAGCCATTAAAGCAAAGAATATCGAAGCAGACCCTAGAGATTACTTGACATTCTTCTGCCTCGGAAACAAAGAGAAGAAGATGGAGAGAGAATATGAAGCTCCAGAAAAACCACAACACGATACAGATTACAATAGAGCTCAAAAAGCTAGGCGTTTTATGATCTACGTCCACGCCAAGACCATGATAGGTATGATCAAATTTCATGAATTTCAAGTTCTAAACTTTCTGGATCTTAAAAAGTTTATTAAATTTGCAGTTGACGATGAATACATAATAATTGGATCAGCCAACATCAACCAGAGGTCAATGGATGGAGGTCGAGACACAGAGATAGCCATGGGCGCTTACCAGCCCCACCATCTAGCCACCAACCAGCTAGCCAGAGGTCAAATTCATGGCTTCAGAATGGCCCTATGGCTCGAGCATCTAAGCCGGGTTGATGACTCTTTTCTAGAACCAGGCAGCTTAGAATGCATTCGAAAAGTGAACCACATTGGCGACACTTACCGGCAACTCTACTTCTCCGAGGAGACGGAAGATTTGCCGGGACATTTACTCAGTTATCCGATCGGAGTTAGTAACACCGGAGAAGTTACAAGTTTAGCTGGTGTGGAGTTCTTTCCTGATAGTAAAGCTAGGGTTTGTGGGTCTAAATCTGATCTTCTTCCTCCTATCCTAACTACTTGA 2265 43.84 MNIYCAHKASTLIFSIKEGLPIGSKVIGRASMAADKLLTGENIEKWLPIFDSKHKSRHGSSKLHVNMQFFHVSKDDSWSRGIPSLDFEGVPFTFFRQRNGCKVTLYQDAHIPNEFTPRISLDGNKTYEPNRCWEDVFDAISNAKHLIYIVGWSVYTKIALIRDVSRGKPGRDVTLGELLVKKAKEGVRVLMLVWDDKTSVKLLKEDGVMATHDEDTAKYFHNSGVHCVLCPRNPDNGKSLVQGVQISTMFTHHQKTIVVDKASSVSHEISSDKRRIVSFIGGIDLCDGRYDTPCHSIFRTLGSTHHNDYHQPCFSAATIKKGGPREPWHDVHCRLEGPIAWDVLINFEQRWRKQCEGKKDLLVKVEELAEIFTPPSPVSSVKDPETWNVQLFRSIDGGSVMGFPSNPLEAAKAGLINSENSTVERSIQDAYIHAIRRAKRFIYIENQYFLGSSHSWTNQNGNVGAINLIPKELSMKIVSKILAGERFAVYIVIPMWPEGVPESGSVQAILNWQRKTMEMMYRDVAEAIKAKNIEADPRDYLTFFCLGNKEKKMEREYEAPEKPQHDTDYNRAQKARRFMIYVHAKTMIGMIKFHEFQVLNFLDLKKFIKFAVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPHHLATNQLARGQIHGFRMALWLEHLSRVDDSFLEPGSLECIRKVNHIGDTYRQLYFSEETEDLPGHLLSYPIGVSNTGEVTSLAGVEFFPDSKARVCGSKSDLLPPILTT 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40567454 40569718 - Bda032052.1 Bda09g01040 13290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01040 754 Gene3D Endonuclease Chain A 401 588 - -
Bda09g01040 754 Gene3D Endonuclease Chain A 119 373 - -
Bda09g01040 754 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 610 628 IPR001736 GO:0003824
Bda09g01040 754 PANTHER PHOSPHOLIPASE D 610 754 IPR015679 -
Bda09g01040 754 SUPERFAMILY Phospholipase D/nuclease 75 368 - -
Bda09g01040 754 PANTHER PHOSPHOLIPASE D 2 588 - -
Bda09g01040 754 PANTHER PHOSPHOLIPASE D 610 754 - -
Bda09g01040 754 Pfam Phospholipase D C terminal 673 744 IPR024632 -
Bda09g01040 754 Pfam Phospholipase D Active site motif 248 289 IPR001736 GO:0003824
Bda09g01040 754 SUPERFAMILY Phospholipase D/nuclease 424 588 - -
Bda09g01040 754 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 248 289 IPR001736 GO:0003824
Bda09g01040 754 SUPERFAMILY Phospholipase D/nuclease 611 685 - -
Bda09g01040 754 PIRSF PLD_plant 603 754 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bda09g01040 754 PIRSF PLD_plant 1 593 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bda09g01040 754 PANTHER PHOSPHOLIPASE D 2 588 IPR015679 -
Bda09g01040 754 SMART pld_4 248 289 IPR001736 GO:0003824
Bda09g01040 754 SMART pld_4 599 628 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00828 Bda-Chr4:58155369 Bda09g01040 Bda-Chr9:40567454 0 dispersed
Bda05g00535 Bda-Chr5:53046427 Bda09g01040 Bda-Chr9:40567454 3.58E-162 dispersed
Bda09g01040 Bda-Chr9:40567454 Bda10g00858 Bda-Chr10:43057432 0 dispersed
Bda09g01040 Bda-Chr9:40567454 Bda10g00782 Bda-Chr10:42226594 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01040 K01115 - qsu:111988169 1036.94