Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01054 ATGGGAGGCGCTGCTTCCAGTTTCGCAAATCATCTTGCCTTGTGTTTGCTGCTCGTTCTCCGGTGGCGCAGCCTATTTGGCGTGGCTTCTGCTGTGTCTCCGGCAGGGGAGGGATATTTGAACGTTCCCTCCTCTGACTTTGCCAACTCTCTCGGCATTGCTGTGGAGTCTATCCGACAAGTTACTCCCATTTTCTCTCAGTTTGCCAATTTCGCCGGCGACTTCCGACTTTCCACCGCCGTTTCCGACTGCCTTGATCTCCTCGACTCTTCTCTTGACGATTTAACTTGGTCACTCTCCGCCACCAGCAATCCTAAGTCCAAAAACAATAGCACCGGAAAGATCAGCTCTGATTTGAAGACATGGTTGAGTGCTGCACTGGTGAACCCAGCGACTTGCATGGATGGATTTGAGGGAACGAGTGGCATTGTCAAGGAACTCGTCTCTGCAGGCATCAGCCAAGTAATATCCATGGTCCAGGAGCTTCTAACTATGGTGGTCGAGTCAGTAAATAGCGAAGGCGATCACAAGGTCGGAAATGAAAACCGATTTCCATCGTGGGTTCGCCCGGACGAGAAGAAACTTCTGGAAGCAAATGGATTTAGTGCAGACGTCGTTGTGGCTGCTGATGGAACTGGGAATTTCACAAAGGTGATGGATGCGGTTTTAGCAGCTCCAGATTATAGCATGCGACGTTTCGTTATATACATAAAAAAGGGTGTCTACAGAGAATACGTCGAGATTAAGAAGAAGAAATGGAACCTCGTGATGATCGGAGATGGAATGGGCGCTACTGTCATAACCGGTAATCGGAGTTACGTCGACGGATGGACAACTTTCCGGTCGGCAACTTTTGCCGTGAGCGGGAGAGGATTTATAGCGAGAGATATAACGTTCGAGAACACTGCCGGACCGGCGAAGCACCAGGCGGTGGCCCTGAGATCTGACTCCGACCTATCGGTATGTTTCAGGTGCGACATTAGAGGCTACCAAGACACGCTCTACACTCACACGATGCGCCAGTTCTACCGAGAATGTCGGATTAGCGGCACCGTCGATTTCCTCTTCGGAGACGGGACTGTAGTTTTCCAAAAATGCCTATTTCTTGCAAGAAAAGGCCTTCCAAATCAGAAAAACACCATCACTGCTCAAGGCCGGAAAGATCCAAATCAGCCCAGCGGCTTCTCCATTCAATTCTGCAACTTTACGGCGGATTCCGACCTGCAGGCCTATCTCAACTCCACGCCCACGTACCTCGGCCGGCCGTGGAAGCCATATTCACGCACCATTATCATGCAGTCTTACATGAGTAACGCCATCAGGCCAGAAGGGTGGCTCGAGTGGAATGGTAATCTACATTTGACTACGCTGTACTATGCGGAGTTTTCAAATTCTGGGCCGGGAGCAATGCCAGCGAGCAGGGTCAAGTGGCCGGGTTACCATGCATTTAACCAGTCCGCTCAGGCTGCTAACTACACGGTGGCGCAATTTATTGACGGAGACCTGTGGTTGCCGTCCACCGGCGTTAAATACACGGCTGGGTTGGGCGTTTGA 1554 51.16 MGGAASSFANHLALCLLLVLRWRSLFGVASAVSPAGEGYLNVPSSDFANSLGIAVESIRQVTPIFSQFANFAGDFRLSTAVSDCLDLLDSSLDDLTWSLSATSNPKSKNNSTGKISSDLKTWLSAALVNPATCMDGFEGTSGIVKELVSAGISQVISMVQELLTMVVESVNSEGDHKVGNENRFPSWVRPDEKKLLEANGFSADVVVAADGTGNFTKVMDAVLAAPDYSMRRFVIYIKKGVYREYVEIKKKKWNLVMIGDGMGATVITGNRSYVDGWTTFRSATFAVSGRGFIARDITFENTAGPAKHQAVALRSDSDLSVCFRCDIRGYQDTLYTHTMRQFYRECRISGTVDFLFGDGTVVFQKCLFLARKGLPNQKNTITAQGRKDPNQPSGFSIQFCNFTADSDLQAYLNSTPTYLGRPWKPYSRTIIMQSYMSNAIRPEGWLEWNGNLHLTTLYYAEFSNSGPGAMPASRVKWPGYHAFNQSAQAANYTVAQFIDGDLWLPSTGVKYTAGLGV 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40784923 40786920 + Bda032065.1 Bda09g01054 13304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01054 517 Gene3D - 199 515 IPR012334 -
Bda09g01054 517 Pfam Pectinesterase 204 501 IPR000070 GO:0030599|GO:0042545
Bda09g01054 517 TIGRFAM PME_inhib: pectinesterase inhibitor domain 51 160 IPR006501 GO:0004857
Bda09g01054 517 Pfam Plant invertase/pectin methylesterase inhibitor 79 154 IPR006501 GO:0004857
Bda09g01054 517 PANTHER PECTINESTERASE 42 515 - -
Bda09g01054 517 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 42 515 - -
Bda09g01054 517 SUPERFAMILY Pectin lyase-like 201 514 IPR011050 -
Bda09g01054 517 CDD PMEI-like_4 27 167 - -
Bda09g01054 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 171 IPR035513 -
Bda09g01054 517 ProSitePatterns Pectinesterase signature 1. 229 248 IPR018040 -
Bda09g01054 517 SMART PMEI_2 43 165 IPR006501 GO:0004857
Bda09g01054 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 165 IPR035513 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01978 Bda09g01054 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01054 Bda-Chr9:40784923 Bda10g00629 Bda-Chr10:40316479 9.01E-143 dispersed
Bda01g01978 Bda-Chr1:56162542 Bda09g01054 Bda-Chr9:40784923 2.31E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01054 K01051 - jre:109015243 704.516