Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01057 ATGGCAACAGCTCAGCTGACTGGATCCCCTATCTCAGCCAGGAGGCTGCCTTCTTTTGATGGGTTTCGGCCTTCTGCTAAAAAGTTTTCCCCTGCCTTTGAGAATGCGAGGATGGGTGGACTAGTGGCCAATCGCCCTTTCCGAAGTCTGGTGATTAAAGCTGCCACTGTCATTCCTCCAAAGTACACCGCTGTGAAGCCTTTGGGTGACAGAGTACTGGTTAAGACAAAAACTGCAGAAGAGAAGACTGAAGGAGGTATCCTGCTTCCAACTACAGCTCAGACCAAGCCCCAAGGAGGTGAAGTGGTTGCTGTCGGTGAAGGCAAATCGATCGGAAAGGCCAAAGTAGTATTTACTGGTGCTCAAGTGGTGTACTCGAAGTATGCTGGGACCGAGTTAGAGTTCGATGGCTCGAAGCATCTTATCTTGAAGGAGGATGACATTGTCGGTGTTCTAGAAACGGATGATGTGAAGGATCTAAAACCCTTGAACGACAGAGTTTTGATCAAGGTTGCCGAAGCAGAAGAGAAGACTGCCGGAGGATTGTTGCTGACAGAAGCAACGAAGGAGAAGCCTTCTATTGGCACGGTGATAGCTGTTGGGCCCGGACCACTCGATGAGGAAGGCAACCGAAAACCGTTACCAATCTCAAACGGCAGCTCAGTGATGTACTCCAAATACGCGGGCAATGACTTCAAGGGCAAGGACGGGGCGGAATATATTGTTTTAAGGATATCAGACGTCATGGCTGTGCTTTCA 759 49.54 MATAQLTGSPISARRLPSFDGFRPSAKKFSPAFENARMGGLVANRPFRSLVIKAATVIPPKYTAVKPLGDRVLVKTKTAEEKTEGGILLPTTAQTKPQGGEVVAVGEGKSIGKAKVVFTGAQVVYSKYAGTELEFDGSKHLILKEDDIVGVLETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKPLPISNGSSVMYSKYAGNDFKGKDGAEYIVLRISDVMAVLS 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40799955 40801745 - Bda034134 Bda09g01057 13307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01057 253 Hamap Co-chaperonin GroES [groES]. 159 253 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 SUPERFAMILY GroES-like 63 153 IPR011032 -
Bda09g01057 253 Hamap Co-chaperonin GroES [groES]. 64 153 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 PRINTS 10kDa chaperonin signature 182 203 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 PRINTS 10kDa chaperonin signature 160 175 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 PRINTS 10kDa chaperonin signature 217 229 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 PRINTS 10kDa chaperonin signature 239 252 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 CDD cpn10 65 152 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 SMART Cpn10_2 64 152 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 SMART Cpn10_2 159 252 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 ProSitePatterns Chaperonins cpn10 signature. 65 89 IPR018369 GO:0005524|GO:0006457
Bda09g01057 253 Gene3D GroES chaperonin 59 154 IPR037124 GO:0006457
Bda09g01057 253 Gene3D GroES chaperonin 155 253 IPR037124 GO:0006457
Bda09g01057 253 PIRSF Cpn21 1 253 IPR017416 GO:0006457|GO:0046914|GO:1901671
Bda09g01057 253 PANTHER GROES CHAPERONIN 1 253 - -
Bda09g01057 253 Pfam Chaperonin 10 Kd subunit 160 251 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 Pfam Chaperonin 10 Kd subunit 65 151 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 SUPERFAMILY GroES-like 159 252 IPR011032 -
Bda09g01057 253 CDD cpn10 160 252 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bda09g01057 253 ProSitePatterns Chaperonins cpn10 signature. 160 184 IPR018369 GO:0005524|GO:0006457
Bda09g01057 253 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 253 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00339 Bda09g01057 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00343 Bda-Chr2:43775156 Bda09g01057 Bda-Chr9:40799955 1.65E-156 dispersed
Bda03g01524 Bda-Chr3:54100427 Bda09g01057 Bda-Chr9:40799955 6.68E-09 dispersed
Bda05g01011 Bda-Chr5:58566498 Bda09g01057 Bda-Chr9:40799955 1.43E-07 dispersed
Bda02g00339 Bda-Chr2:43690517 Bda09g01057 Bda-Chr9:40799955 2.08E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01057 K04078 - qsu:111997423 398.282