Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01062 ATGGGAGCTGATAAAGTATCATGGCGATCTGTTCTTCCATGCTGCAAGCCGGAGTGCAGGTCCGACACCTGCACTAAAGTTATGGCGAAGCAGAGTTCGTTTCAGAGGCTTTCGCTGTTGGATTTGAGCAATCCAAGCTCCACGCTTTCCGAGGATCTGTCGGTGTCTCTTGCCGGATCCGATCTTCATATTTTCACCCTGGCTGAACTGAAGGTGATAACCCAGAATTTCTCGCCGTCTAATTTTCTTGGGGAAGGTGGGTTTGGACCTGTGCATAAGGGCTTCATTGACGACAAGCTTAGACCAGGGCTGAAGGCTCAGCCCGTGGCGGTCAAGCTCTTGGATTTGGATGGCTTGCAAGGACATCGGGAGTGGTTGACTGAAGTGTTCTTTCTGGGGCAGTTGATTCATCCGCACCTTGTGAAGCTCATAGGGTATTGCTGCGAAGATGAACACAGGCTACTGGTTTATGAATACATGCCGAGAGGAAGCTTAGAGAATCAACTCTTCAGACGCTATTCGGTGTCCCTGCCATGGTCGTCGAGAATGAAAATCGCTCTTGGCGCTGCAAAAGGTCTCGCCTTCCTGCACGAGGCCAATAAACCTGTCATTTATCGGGACTTCAAGGCTTCAAATATATTGCTAGACTCCGATTTCACTTCAAAACTCTCAGATTTTGGTTTGGCGAAAGATGGGCCAGAAGGAGATGATACCCACGTCTCAACCAGAGTGATGGGGACGCACGGCTATGCTGCTCCTGAATATATCATGACTGGCCATTTGACGGCAATGAGTGATGTGTACAGTTTCGGCGTGGTGCTGCTGGAGCTGCTAACGGGGAGGAGATCAGTGGACAAGAGTCGCCCTCCGAGGGAGCACAACTTGGTAGACTGGGCCAGGCCTATGCTCAATGACCCTCGAAAGCTTTGCCGAGTGATGGACCCGAGGCTGGAAGGGCAGTACTCGGAAATGGGGGCTCGAAAGGCGGCGGCATTGGCTTATCAATGCCTGAGCCACCGCCCCAAACACAGGCCGGCCATGAGCACCGTCGTTAAGACTTTGGAACCGCTCAAGGATTTTGACGACGTCCTCGTCGGACCCTTTGTCTACACCGTCGCACCCGAGAGCCATGACTTGGCCGGTAAGGAAGATGGAAGGAAAAGCCATGCACAAAGGGAGGAAAGCAAAGAAAATGGGCAGCGCCGCCACTATAATCATCAACGCAGACGTCAAAAATCACCGAACGCCGACTCGGAGAAAGCTCCGGGTCAAAAAATAACAGAAAGTAAATAG 1293 51.74 MGADKVSWRSVLPCCKPECRSDTCTKVMAKQSSFQRLSLLDLSNPSSTLSEDLSVSLAGSDLHIFTLAELKVITQNFSPSNFLGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGLQGHREWLTEVFFLGQLIHPHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFRRYSVSLPWSSRMKIALGAAKGLAFLHEANKPVIYRDFKASNILLDSDFTSKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKSRPPREHNLVDWARPMLNDPRKLCRVMDPRLEGQYSEMGARKAAALAYQCLSHRPKHRPAMSTVVKTLEPLKDFDDVLVGPFVYTVAPESHDLAGKEDGRKSHAQREESKENGQRRHYNHQRRRQKSPNADSEKAPGQKITESK 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40837728 40839390 - Bda032072.1 Bda09g01062 13312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01062 430 SUPERFAMILY Protein kinase-like (PK-like) 53 355 IPR011009 -
Bda09g01062 430 PANTHER OS01G0588500 PROTEIN-RELATED 23 398 - -
Bda09g01062 430 MobiDBLite consensus disorder prediction 376 430 - -
Bda09g01062 430 Gene3D Phosphorylase Kinase; domain 1 41 159 - -
Bda09g01062 430 CDD STKc_IRAK 83 357 - -
Bda09g01062 430 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 23 398 - -
Bda09g01062 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bda09g01062 430 ProSiteProfiles Protein kinase domain profile. 77 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01062 430 Pfam Protein tyrosine and serine/threonine kinase 81 354 IPR001245 GO:0004672|GO:0006468
Bda09g01062 430 MobiDBLite consensus disorder prediction 377 401 - -
Bda09g01062 430 Gene3D Transferase(Phosphotransferase) domain 1 160 364 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda09g01062 Bda11g01016 CCT
Bda09g01062 Bda11g01016 ECH
Bda02g00350 Bda09g01062 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01062 Bda-Chr9:40837728 Bda15g00927 Bda-Chr15:16245044 2.57E-148 dispersed
Bda05g00273 Bda-Chr5:44333746 Bda09g01062 Bda-Chr9:40837728 4.16E-153 transposed
Bda09g00346 Bda-Chr9:4403237 Bda09g01062 Bda-Chr9:40837728 3.27E-142 transposed
Bda11g01016 Bda-Chr11:9939038 Bda09g01062 Bda-Chr9:40837728 0 transposed
Bda02g00350 Bda-Chr2:43848957 Bda09g01062 Bda-Chr9:40837728 0 wgd
Bda02g00366 Bda-Chr2:44070798 Bda09g01062 Bda-Chr9:40837728 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69812 PF07714 PK_Tyr_Ser-Thr 1.30E-44 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01062 - - jre:109008510 667.537