Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01076 ATGGTAACACCAGAAGAGATTATTACAAGAACTCTTGATCCTGTGGCTGCATTGGGTAGCAGGGATGCATTGGCTAAAACGATTTATTCACGGTTGTTTGATTGGCTTGTAGATAACATCAACAATTCAATTGGACAAGACCCAAACTCAAAATCATTGATAGGAGTTCTTGATATTTATGGATTTGAAAGTTTTAAGTTCAACAGCTTTGAGCAGTTCTGTATCAATTTTACGAACGAAAAACTGCAACAACATTTTAATCAGCACGTCTTTAAAATGGAACAGGAAGAATATACAAAAGAAGAGATCAACTGGAGCTATATAGAGTTTGTTGATAATCAGGACGTGTTGGATCTGATTGAAAAGAAACCTGGAGGAATCATCGCACTTTTAGATGAGGCCTGCATGTTTCCAAAATCCACACATGAAACATTTGCGCAGAAGTTATACCAGACATTCAAGAACAACAAACGCTTCATTAAACCTAAACTTTCACGTACCAGTTTTACCATTTCTCATTATGCTGGAGAGGTAACATATCTGGCTGATCTATTTCTCGATAAAAACAAAGACTACGTGGTGGCTGAACATCAGGATCTGTTAACAGCTGCAAAGTGTTCGTTTGTGGCGGGTTTATTTCCTCCTCTCCCTGAAGAATCATCAAAATCGTCAAAATTTTCTTCCATTGGATCACGCTTTAAGTTACAACTTCAGTCTTTGATGGAGACACTGAACTCGACAGAACCTCACTACATAAGATGTGTGAAGCCAAACAATGTTCTCAAGCCAGCTATTTTTGAGAATTTGAATATTATTCAACAGTTACGATGTGGTGGTGTTCTTGAAGCCATCAGGATTAGTTGTGCTGGATATCCTACAAGGCGAACATTTTATGAATTCCTTCTTCGCTTTGGGGTTCTTGCTCCAGAAGTTCTGGAAGGGAGCTATGATGACAAGGTAGCATGCAAAATGATTCTGGATAAAATGGGATTAAAAGGTTACCAGGTAGGTAAAACTAAGGTGTTCCTAAGAGCTGGTCAAATGGCTTCTTTGGATGCAAAAAGAATCGAAGTACTTGGAAATGCGGCCAGAATTATTCAAAGACAAATTCGTACATATATTTCTCGCAAAGAATTTGTTGCATTGCGTGAAGCTGCCATTCAACTCCAATCATTTTCTAGAGGTATATTAGCTCGTAAACTATATGAGCAATTGCGAAGGGAAGCAGGAGCTTTAAGAATTCAGAAGAATTTCAGACAATATCGAGCAAGAAAATCTTACCTAAGTCTACAGTCATCTGCAATCACTTTGCAAACAGGATTGAGAGCAATGACGGCTCGCAATGAATTCAGATTCAGAAAAAGCACGAAGGCTGCAACATTTATCCAGGCTCATCTCCGTCGCCATATGGCATATTCTTATTTTAAAAGTCTCCAAAAGGCTGTGTTATATACCCAGTGTGGATGGAGGCGAAGAGTTGCACGAAGAGAGCTTAGAATGCTTAAGATGGCTGCTCGGGAAACCGGAGCGCTTAAAGAAGCAAAAGACAAATTGGAAAAACGCGTGGAAGAACTTACTTGGCGCTTGCAACTCGAGAAGCGATTGCGGACTGATCTGGAAGAGGAAAAAGCCCAAGAAATATCCAAGTTACGAGATGCTTTGCATGATATGCAATTTCAAATTGACGACGCAAACACTAGGGTTATCCAGGAGAGAGAGGCAGCTCGGAAAGCTATTGAAGAGGCACCTCCAGTCATCAAGGAGACTCCTGTTGTTGTCGAGGACACAGAAAAAGTTAGTTTGTTGCTGGCTGAGGTTGAGAGCCTTAAGGCTTCGCTGCTATCAGAAAGAAATTCAACGGAAGAGGCCAGGAAATCAAGTGCAAACGCTGAAGCTAGAAACACAGAGCTATTAAAAAAACTAGAAAATGCTGAACAAAAGGTTGATCAGCTTCAGGAATCTGTGCAAAGGCTAGAAGAGAAACTTTCAAATTCAGAGTCAGAGAACCAAGTTCTTCGTCAGCAGGCACTGACTATGTCACCCACTGGGAAAAGTTTATCTTCAAGACCAAAGTCAATGATAGTTCAGAGAACACCAGAGAATGGGAATATCCTACCTGGAGAACCCAAGGTTGCATCGGATATGACTCTTGCTCTTTCAAATGCACGCGAACCTGATTCAGAGGAAAGACCACAGAAATCTCTCAATGAAAAACAGCAGGAGAATCAGGACTTGTTAATCAAGTGCGTGTCACAAGATTTAGGATTCTCTGGGGGCAAACCAGTTGCTGCATGCGTTATATATAAATGCCTTCTACACTGGAGGTCGTTTGAAGTTGAGAGGACTAGCATATTTGATAGGATCATTCAAACAATAGCTTCAGCAATAGAGGTCCAAGATAACAATGATCTATTAGCCTATTGGTTATCTAATGCATCCACTTTACTATTGCTGCTCCAACACACACTCAAAGCAAGCGGAGCAGCAAGCATGACACCTCAAAGGCGGCGAACAACATCAGCTTCTATTTTTGGAAGGATGTCCCATGGGTTACGGGCATCACCTCAAAGTTCTGGACTCTCATTTTTAAATGGTAGAGGACTAGGTGGCAGACTGGAGGATTTTCGACAGGTTGAGGCTAAATATCCTGCACTATTGTTCAAGCAGCAGCTCACTGCATTCCTTGAGAAGATATATGGAATGATGAGAGATAATTTAAAGAAAGAAATCGCGCCATTACTTGGACTATGTATTCAGGCACCCAGGACATCACGAGCAAGTTTGGTTAAAGGACGTTCTCAAGCTAATGCGGCTGCTCAGCAAGCTTTGATTGCCCATTGGCAAAGCATTGTAAAAAGCTTAAACAATTATTTGAAGATGATGAAATCCAACTACGTACCCCCGTTCCTAGTCCGGAAAGTTTTTACTCAGATATTCTCATTCATTAACGTTCAGCTATTCAACAGTCTTCTTTTGAGACGGGAGTGCTGTTCATTCAGTAATGGAGAGTATGTGAAAGCCGGTTTGGGAGAATTAGAACAGTGGTGCTATGAGGCAACTGAGGAATATGCAGGATCGGCCTGGGATGAGTTGAAGCACATTAGACAAGCTGTTGGATTCCTAGTTATACATCAGAAACCAAAGAAATCTTTGATTGAAATAACGAAAGAATTATGTCCAGTGCTTAGCATTCAACAGTTGTATAGGATCAGCACAATGTACTGGGATGATAAGTATGGTACTCACAGTGTGTCTTCAGAAGTTATTTCTAGTATGAGAGTTATGATGACTGAAGAATCAAATCCTGCCGTTAGCAGCTCTTTCCTATTGGACGATGACTCGAGTATCCCATTTTCAGTTGATGACTTTTCGAAGTCAATAGAAAAGGTTGACACAGCTGATGTTGATCCTCCTCCATTGATTAGAGAAAACTCAGGCTTCGTATTCTTACTACAACGCGCTGATTAA 3468 40.86 MVTPEEIITRTLDPVAALGSRDALAKTIYSRLFDWLVDNINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQDLLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLEGSYDDKVACKMILDKMGLKGYQVGKTKVFLRAGQMASLDAKRIEVLGNAARIIQRQIRTYISRKEFVALREAAIQLQSFSRGILARKLYEQLRREAGALRIQKNFRQYRARKSYLSLQSSAITLQTGLRAMTARNEFRFRKSTKAATFIQAHLRRHMAYSYFKSLQKAVLYTQCGWRRRVARRELRMLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEISKLRDALHDMQFQIDDANTRVIQEREAARKAIEEAPPVIKETPVVVEDTEKVSLLLAEVESLKASLLSERNSTEEARKSSANAEARNTELLKKLENAEQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKSLSSRPKSMIVQRTPENGNILPGEPKVASDMTLALSNAREPDSEERPQKSLNEKQQENQDLLIKCVSQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRIIQTIASAIEVQDNNDLLAYWLSNASTLLLLLQHTLKASGAASMTPQRRRTTSASIFGRMSHGLRASPQSSGLSFLNGRGLGGRLEDFRQVEAKYPALLFKQQLTAFLEKIYGMMRDNLKKEIAPLLGLCIQAPRTSRASLVKGRSQANAAAQQALIAHWQSIVKSLNNYLKMMKSNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLGELEQWCYEATEEYAGSAWDELKHIRQAVGFLVIHQKPKKSLIEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMTEESNPAVSSSFLLDDDSSIPFSVDDFSKSIEKVDTADVDPPPLIRENSGFVFLLQRAD 1155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 41176535 41188150 - Bda032088.2 Bda09g01076 13326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01076 1155 SMART MYSc_2a 1 357 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda09g01076 1155 ProSiteProfiles IQ motif profile. 407 436 IPR000048 GO:0005515
Bda09g01076 1155 PANTHER MYOSIN-5 1 1151 - -
Bda09g01076 1155 Pfam DIL domain 974 1077 IPR002710 -
Bda09g01076 1155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 507 IPR027417 -
Bda09g01076 1155 Coils Coil 561 581 - -
Bda09g01076 1155 Gene3D Kinesin motor domain 44 290 IPR036961 -
Bda09g01076 1155 ProSiteProfiles IQ motif profile. 382 411 IPR000048 GO:0005515
Bda09g01076 1155 ProSiteProfiles IQ motif profile. 361 388 IPR000048 GO:0005515
Bda09g01076 1155 ProSiteProfiles Myosin motor domain profile. 1 356 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda09g01076 1155 PRINTS Myosin heavy chain signature 106 134 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda09g01076 1155 PRINTS Myosin heavy chain signature 53 81 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda09g01076 1155 ProSiteProfiles Dilute domain profile. 786 1098 IPR002710 -
Bda09g01076 1155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 409 IPR027417 -
Bda09g01076 1155 Coils Coil 627 675 - -
Bda09g01076 1155 Gene3D - 65 247 - -
Bda09g01076 1155 Gene3D Myosin VI head, motor domain, U50 subdomain 16 43 - -
Bda09g01076 1155 ProSiteProfiles IQ motif profile. 430 459 IPR000048 GO:0005515
Bda09g01076 1155 SMART iq_5 406 428 IPR000048 GO:0005515
Bda09g01076 1155 SMART iq_5 381 403 IPR000048 GO:0005515
Bda09g01076 1155 SMART iq_5 477 499 IPR000048 GO:0005515
Bda09g01076 1155 SMART iq_5 429 451 IPR000048 GO:0005515
Bda09g01076 1155 SMART iq_5 454 476 IPR000048 GO:0005515
Bda09g01076 1155 SMART iq_5 358 380 IPR000048 GO:0005515
Bda09g01076 1155 CDD MyosinXI_CBD 737 1121 IPR037975 GO:0007015
Bda09g01076 1155 Pfam Myosin head (motor domain) 3 344 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda09g01076 1155 Gene3D - 410 456 - -
Bda09g01076 1155 Gene3D - 457 506 - -
Bda09g01076 1155 Gene3D - 359 409 - -
Bda09g01076 1155 PANTHER MYOSIN 1 1151 - -
Bda09g01076 1155 ProSiteProfiles IQ motif profile. 455 482 IPR000048 GO:0005515
Bda09g01076 1155 Coils Coil 603 623 - -
Bda09g01076 1155 Pfam IQ calmodulin-binding motif 361 379 IPR000048 GO:0005515
Bda09g01076 1155 Pfam IQ calmodulin-binding motif 456 476 IPR000048 GO:0005515
Bda09g01076 1155 Pfam IQ calmodulin-binding motif 410 427 IPR000048 GO:0005515
Bda09g01076 1155 Pfam IQ calmodulin-binding motif 383 402 IPR000048 GO:0005515
Bda09g01076 1155 Gene3D - 291 354 - -
Bda09g01076 1155 Coils Coil 501 542 - -
Bda09g01076 1155 SMART DIL_2 973 1080 IPR002710 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00381 Bda09g01076 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00767 Bda-Chr4:57128645 Bda09g01076 Bda-Chr9:41176535 3.80E-78 dispersed
Bda09g01076 Bda-Chr9:41176535 Bda13g00031 Bda-Chr13:504384 0 dispersed
Bda02g00381 Bda-Chr2:44180204 Bda09g01076 Bda-Chr9:41176535 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01076 K10357 - rcu:8272524 1954.49