Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01078 | ATGAAGAATCATCAGGAACACGACGGTGAAGAGGAAGAGGAGGAGAGGACCATGGCCGGAGAAGGGGAGGAAGAGGTCGGAGATGTTGGAGAGGTGGGTTCGAGCTTGACAATGGAGAGGGTAGCTGCAGCAAAGCAATTTATCGAGAATCACTATAAAGCTCAGAAAAAACACATTCAAGAACGAAAAGAAAGGCGCTCTGTGTTGGAAAGGAAGTTGGCAACTTCTGATGCATCAGAAGAGGAACAAATTAATCTTTTGAAAGATTTGGAGCGTAAAGAAACTGACTATATGCGACTCAAAAGGCATAAAATCTGTGTCGATGACTTTGATCTACTAACAATTATTGGACGAGGAGCCTTTGGAGAGGTAAGACTCTGCAGGGACAAGAAATCAGGCAACATTTATGCCATGAAAAAATTGAAGAAATCGGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTCGCTGAAGTTGCCAGCCACTGCATTGTTAAACTCTATTATTCCTTTCAAGATGCTGAATATTTATATCTAATTATGGAGTATCTACCTGGTGGTGATATGATGACTTTGCTGATCAGAGAGGAAACTTTGACCGAATCTGTCGCTAAATTTTACATCGCTCAAAGTGTTCTTGCGATTGAGTCTATTCATAAGCATAATTACATTCATAGAGACATAAAACCCGACAATCTTCTTCTAGACAAAAATGGTCATATGAAACTCTCTGATTTTGGCCTCTGCAAACCTCTTGACTGCTCAAATTTATCCTCGATAAATGAAAATGAAGTTCTAGATGATAAGAACTTGAATGAAACTATGGACGTCGATGAATCCTCTCCAGCTACTGTAAGTGGAAGACGATGGAAGAGTCCTCTCGAACAACTTCAGCACTGGCAGATCAACAGGAGGAAACTGGCGTATTCCACTGTTGGCACTCCCGATTATATCGCTCCGGAAGTATTGCTGAAGAAAGGATATGGCATGGAGTGTGACTGGTGGTCGCTTGGTGCAATACTGTATGAGATGCTTGTTGGTTATCCTCCGTTTTATGCCGATGATCCTGTAACAACCTGCAGGAAGATTGTGCATTGGAGGAATCACTTGAAATTTCCTAATGAAACAAGGCTTTCGCCCGAAGTGAAGGATCTAATATCGAGGCTTCTCTGTGATGTTGAGCACAGACTTGGTACGGGAGGAGCTGATCGAATCAAAGTAACCTTTCTAAACTCATTTGTGTTTTATTACATCCTACTACTCGTGTTAATACGATTTCGAACCATTATGCAGGCTCACCCTTGGTTCAAAGATGTTGCGTGGGACAAACTCTATGAAATGGAGGCAGCTTTTAAACCCGAGGTCAACGGGGAACTTGACACTCAAAATTTTATGAAGTTCGACGAGGTGGAACAAGCAACCACTAGAGCTGGATCGGGACCAATGAGGAAGATGCTGTTGACTCCAAAGGATCTAAGTTTTGTTGGCTACACATACAAGAATTTCGAGGCAGTCAAAGGAGTTCTCCGCTCTTTAGGTACGGACTTCGTCCGATCATCCCATTTTTTAAGCATCTTGCCTGTCACTCATCTCGTCTCGTCTATTTCTTTCATAAAAATGCGATGCTTTTAA | 1650 | 42.24 | MKNHQEHDGEEEEEERTMAGEGEEEVGDVGEVGSSLTMERVAAAKQFIENHYKAQKKHIQERKERRSVLERKLATSDASEEEQINLLKDLERKETDYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCRDKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTESVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDKNLNETMDVDESSPATVSGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYADDPVTTCRKIVHWRNHLKFPNETRLSPEVKDLISRLLCDVEHRLGTGGADRIKVTFLNSFVFYYILLLVLIRFRTIMQAHPWFKDVAWDKLYEMEAAFKPEVNGELDTQNFMKFDEVEQATTRAGSGPMRKMLLTPKDLSFVGYTYKNFEAVKGVLRSLGTDFVRSSHFLSILPVTHLVSSISFIKMRCF | 549 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 41201901 | 41205948 | - | Bda032090.1 | Bda09g01078 | 13328 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01078 | 549 | Pfam | Protein kinase domain | 308 | 402 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01078 | 549 | Pfam | Protein kinase domain | 112 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01078 | 549 | SMART | serkin_6 | 110 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01078 | 549 | Gene3D | Transferase(Phosphotransferase) domain 1 | 194 | 261 | - | - | |
Bda09g01078 | 549 | SUPERFAMILY | Protein kinase-like (PK-like) | 92 | 430 | IPR011009 | - | |
Bda09g01078 | 549 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Bda09g01078 | 549 | SMART | pkinase_C_6 | 443 | 507 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bda09g01078 | 549 | PANTHER | AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN | 30 | 520 | - | - | |
Bda09g01078 | 549 | CDD | STKc_NDR_like | 108 | 506 | - | - | |
Bda09g01078 | 549 | Gene3D | Phosphorylase Kinase; domain 1 | 73 | 193 | - | - | |
Bda09g01078 | 549 | MobiDBLite | consensus disorder prediction | 12 | 28 | - | - | |
Bda09g01078 | 549 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 30 | 520 | - | - | |
Bda09g01078 | 549 | ProSiteProfiles | Protein kinase domain profile. | 110 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01078 | 549 | Gene3D | Transferase(Phosphotransferase) domain 1 | 315 | 462 | - | - | |
Bda09g01078 | 549 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 229 | 241 | IPR008271 | GO:0004672|GO:0006468 | |
Bda09g01078 | 549 | ProSitePatterns | Protein kinases ATP-binding region signature. | 116 | 139 | IPR017441 | GO:0005524 | |
Bda09g01078 | 549 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 443 | 515 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g01078 | Bda-Chr9:41201901 | Bda10g00636 | Bda-Chr10:40402956 | 0 | dispersed | |
Bda09g01078 | Bda-Chr9:41201901 | Bda09g01079 | Bda-Chr9:41210689 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69813 | PF00069 | Pkinase | 5.60E-43 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01078 | K08790 | - | cit:102622557 | 837.025 |