Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01078 ATGAAGAATCATCAGGAACACGACGGTGAAGAGGAAGAGGAGGAGAGGACCATGGCCGGAGAAGGGGAGGAAGAGGTCGGAGATGTTGGAGAGGTGGGTTCGAGCTTGACAATGGAGAGGGTAGCTGCAGCAAAGCAATTTATCGAGAATCACTATAAAGCTCAGAAAAAACACATTCAAGAACGAAAAGAAAGGCGCTCTGTGTTGGAAAGGAAGTTGGCAACTTCTGATGCATCAGAAGAGGAACAAATTAATCTTTTGAAAGATTTGGAGCGTAAAGAAACTGACTATATGCGACTCAAAAGGCATAAAATCTGTGTCGATGACTTTGATCTACTAACAATTATTGGACGAGGAGCCTTTGGAGAGGTAAGACTCTGCAGGGACAAGAAATCAGGCAACATTTATGCCATGAAAAAATTGAAGAAATCGGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTCGCTGAAGTTGCCAGCCACTGCATTGTTAAACTCTATTATTCCTTTCAAGATGCTGAATATTTATATCTAATTATGGAGTATCTACCTGGTGGTGATATGATGACTTTGCTGATCAGAGAGGAAACTTTGACCGAATCTGTCGCTAAATTTTACATCGCTCAAAGTGTTCTTGCGATTGAGTCTATTCATAAGCATAATTACATTCATAGAGACATAAAACCCGACAATCTTCTTCTAGACAAAAATGGTCATATGAAACTCTCTGATTTTGGCCTCTGCAAACCTCTTGACTGCTCAAATTTATCCTCGATAAATGAAAATGAAGTTCTAGATGATAAGAACTTGAATGAAACTATGGACGTCGATGAATCCTCTCCAGCTACTGTAAGTGGAAGACGATGGAAGAGTCCTCTCGAACAACTTCAGCACTGGCAGATCAACAGGAGGAAACTGGCGTATTCCACTGTTGGCACTCCCGATTATATCGCTCCGGAAGTATTGCTGAAGAAAGGATATGGCATGGAGTGTGACTGGTGGTCGCTTGGTGCAATACTGTATGAGATGCTTGTTGGTTATCCTCCGTTTTATGCCGATGATCCTGTAACAACCTGCAGGAAGATTGTGCATTGGAGGAATCACTTGAAATTTCCTAATGAAACAAGGCTTTCGCCCGAAGTGAAGGATCTAATATCGAGGCTTCTCTGTGATGTTGAGCACAGACTTGGTACGGGAGGAGCTGATCGAATCAAAGTAACCTTTCTAAACTCATTTGTGTTTTATTACATCCTACTACTCGTGTTAATACGATTTCGAACCATTATGCAGGCTCACCCTTGGTTCAAAGATGTTGCGTGGGACAAACTCTATGAAATGGAGGCAGCTTTTAAACCCGAGGTCAACGGGGAACTTGACACTCAAAATTTTATGAAGTTCGACGAGGTGGAACAAGCAACCACTAGAGCTGGATCGGGACCAATGAGGAAGATGCTGTTGACTCCAAAGGATCTAAGTTTTGTTGGCTACACATACAAGAATTTCGAGGCAGTCAAAGGAGTTCTCCGCTCTTTAGGTACGGACTTCGTCCGATCATCCCATTTTTTAAGCATCTTGCCTGTCACTCATCTCGTCTCGTCTATTTCTTTCATAAAAATGCGATGCTTTTAA 1650 42.24 MKNHQEHDGEEEEEERTMAGEGEEEVGDVGEVGSSLTMERVAAAKQFIENHYKAQKKHIQERKERRSVLERKLATSDASEEEQINLLKDLERKETDYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCRDKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTESVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDKNLNETMDVDESSPATVSGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYADDPVTTCRKIVHWRNHLKFPNETRLSPEVKDLISRLLCDVEHRLGTGGADRIKVTFLNSFVFYYILLLVLIRFRTIMQAHPWFKDVAWDKLYEMEAAFKPEVNGELDTQNFMKFDEVEQATTRAGSGPMRKMLLTPKDLSFVGYTYKNFEAVKGVLRSLGTDFVRSSHFLSILPVTHLVSSISFIKMRCF 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 41201901 41205948 - Bda032090.1 Bda09g01078 13328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01078 549 Pfam Protein kinase domain 308 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01078 549 Pfam Protein kinase domain 112 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01078 549 SMART serkin_6 110 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01078 549 Gene3D Transferase(Phosphotransferase) domain 1 194 261 - -
Bda09g01078 549 SUPERFAMILY Protein kinase-like (PK-like) 92 430 IPR011009 -
Bda09g01078 549 MobiDBLite consensus disorder prediction 1 35 - -
Bda09g01078 549 SMART pkinase_C_6 443 507 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda09g01078 549 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 30 520 - -
Bda09g01078 549 CDD STKc_NDR_like 108 506 - -
Bda09g01078 549 Gene3D Phosphorylase Kinase; domain 1 73 193 - -
Bda09g01078 549 MobiDBLite consensus disorder prediction 12 28 - -
Bda09g01078 549 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 520 - -
Bda09g01078 549 ProSiteProfiles Protein kinase domain profile. 110 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01078 549 Gene3D Transferase(Phosphotransferase) domain 1 315 462 - -
Bda09g01078 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Bda09g01078 549 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Bda09g01078 549 ProSiteProfiles AGC-kinase C-terminal domain profile. 443 515 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01078 Bda-Chr9:41201901 Bda10g00636 Bda-Chr10:40402956 0 dispersed
Bda09g01078 Bda-Chr9:41201901 Bda09g01079 Bda-Chr9:41210689 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69813 PF00069 Pkinase 5.60E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01078 K08790 - cit:102622557 837.025