Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01121 ATGTCGTGGCAGGCGTACGTAGATGACCATTTGATGTGCGAAATCGACGGCCAAGGACAGCATCTCTCCGCCGCCGCCATCCTCGGTCATGACGGTAGTGTTTGGGCCCAAAGCTCTTCCTTCCCTCAGCTGAAGCCCAATGAGATTGCTGACATCCTCAAGGACTTTGACGAACCAGGTCATCTTGCTCCCTCTGGTTTACATCTTGGGGCTACAAAATACATGGTAATCCAAGGAGAGCCCGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGAATCACAATCAAGAAGACTGGACAAGCACTAATTTTCGGTATCTATGAAGAGCCCGTCACTCCCGGACAATGCAACATGGTAGTGGAGAGGTTGGGGGATTACCTGATTGACCAAGGTCTTTAA 402 51.24 MSWQAYVDDHLMCEIDGQGQHLSAAAILGHDGSVWAQSSSFPQLKPNEIADILKDFDEPGHLAPSGLHLGATKYMVIQGEPGAVIRGKKGSGGITIKKTGQALIFGIYEEPVTPGQCNMVVERLGDYLIDQGL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 41825566 41828026 + Bda032141.1 Bda09g01121 13371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01121 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Bda09g01121 133 Pfam Profilin 1 132 IPR005455 GO:0003779
Bda09g01121 133 SMART prof_2 1 133 IPR005455 GO:0003779
Bda09g01121 133 PANTHER PROFILIN 1 133 IPR005455 GO:0003779
Bda09g01121 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bda09g01121 133 PANTHER PROFILIN 1 133 - -
Bda09g01121 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
Bda09g01121 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Bda09g01121 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Bda09g01121 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Bda09g01121 133 CDD PROF 2 132 IPR005455 GO:0003779
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda09g01121 Bda11g01079 CCT
Bda01g02037 Bda09g01121 CCT
Bda09g01121 Bda11g01079 ECH
Bda01g02037 Bda09g01121 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01121 Bda-Chr9:41825566 Bda11g01079 Bda-Chr11:10534880 8.15E-73 dispersed
Bda02g00405 Bda-Chr2:44628453 Bda09g01121 Bda-Chr9:41825566 1.43E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01121 K05759 - tcc:18588487 249.21