Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01128 ATGGATGTCTCGGAGGAAGACCAGCTCGAGCGAGTAGACTCGGCTCCTGACTCAGAAGGATTGTCAATGAGCTCGAGCTTCTCCTCGCTCCTCACCATGTCTAGCTCCGGCAGCATCTCCTCCACGAGCGTCGGCTCCGGTGAAATGGAGTCTGTGGCGCCGGCACTGGTCAATCGTACAATGTCCGGTGATGTCTCGGAGAGCGTGAAAATGAAGGCGGCAGGAAGGCCGGAGAAGTGCGTGGGGAAGAACAATAAGGGAGTAAGTTGGGGGTTTACTTCCGTGATTGGACGGCGGAGAGAGATGGAGGATGCCGTCGCTGTGTTTCCAGGTTTCATGTCCCGCACTTGCGATCATGTCGGTGGTTGTACGGCTTCCGGCTCCAGAACATCCGCCGAGATCTCGCCGATCCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTGAGGTGGCTAAATTTTGTGCGAAGAGAATGCAGCAAGTGGTAGCAGAGGAGTGGGAGAAGGAAACAGCGACTGGCTATGAATGGCGAAGGAGGTGGGAAGTTGCATTTACTAATGGTTTTGAAAGGACGGACAATGAGGTCGCAACGGAGGCGGTGACAGCCGACATGGTCGGATCAACCGCAGTCGTGGTGGTTGTCTCTAGCTGCCAAATAATTGTATCCAATTGTGGCGACTCAAGGGCAGTGCTTTGCAGGGAGACTCACACAGTCCCTCTCACCGTCGATCAAAAGCCTGATAGAGAGGATGAGCTCACGAGAATTGAAGAACTGGGAGGGAAAGTCATAGACTGGATGGGTGCTAGAGTACTTGGAGTTCTTGCCATGTCCAGAGCCATAGGTGATCGATATCTACGACCATGGATTATTCCAGTTCCTGAGATAACTTTTATGACTAGAAGTGACGAGGACGAATGCGTTATATTAGCGAGTGATGGGCTATGGGATGTAATGACCAACGAAGAGGTGGGTGAGGTGGTTCGTCGATTTTCAAAACGGCGAGCGAAATCTGCAACTATCAACGAGACGACTATGGCACAAACTGTTGCAGATAATCTCACCAAAATAGCATTTGGAAGAAACAGTTCTGATAACATTTCCATTGTTGTCATCGATCTGAAGTCGAGGCGAACACGGCCGAAGAATTCTGTTTTAGACTCTTATTGA 1170 51.11 MDVSEEDQLERVDSAPDSEGLSMSSSFSSLLTMSSSGSISSTSVGSGEMESVAPALVNRTMSGDVSESVKMKAAGRPEKCVGKNNKGVSWGFTSVIGRRREMEDAVAVFPGFMSRTCDHVGGCTASGSRTSAEISPIHFFGVYDGHGGSEVAKFCAKRMQQVVAEEWEKETATGYEWRRRWEVAFTNGFERTDNEVATEAVTADMVGSTAVVVVVSSCQIIVSNCGDSRAVLCRETHTVPLTVDQKPDREDELTRIEELGGKVIDWMGARVLGVLAMSRAIGDRYLRPWIIPVPEITFMTRSDEDECVILASDGLWDVMTNEEVGEVVRRFSKRRAKSATINETTMAQTVADNLTKIAFGRNSSDNISIVVIDLKSRRTRPKNSVLDSY 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 41965633 41968227 - Bda032151.1 Bda09g01128 13378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01128 389 SMART PP2C_4 78 372 IPR001932 -
Bda09g01128 389 Pfam Protein phosphatase 2C 97 367 IPR001932 -
Bda09g01128 389 CDD PP2Cc 91 374 IPR001932 -
Bda09g01128 389 SUPERFAMILY PP2C-like 84 375 IPR036457 -
Bda09g01128 389 Gene3D - 77 383 IPR036457 -
Bda09g01128 389 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 43 381 - -
Bda09g01128 389 MobiDBLite consensus disorder prediction 1 26 - -
Bda09g01128 389 ProSiteProfiles PPM-type phosphatase domain profile. 89 374 IPR001932 -
Bda09g01128 389 ProSitePatterns PPM-type phosphatase domain signature. 139 147 IPR000222 GO:0043169
Bda09g01128 389 PANTHER ALPHABET, ISOFORM E-RELATED 43 381 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01128 Bda-Chr9:41965633 Bda10g00866 Bda-Chr10:43167648 3.42E-86 dispersed
Bda09g01128 Bda-Chr9:41965633 Bda14g00146 Bda-Chr14:997516 2.04E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01128 K14497 - vvi:109121390 495.738