Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01132 | ATGTCAGACCAACCAAACTCGGAGACTGAGTCAGGGTTCACCAACTTGTCTTCTCCACCGTCCTCTTCGCCCGGAGAATCGACTGCTCAATCGCCGCAGAAACGATCAGCTCAAAATATCAATCCTGACCATCCCGTTTTCCGGGGAGTCCGAAAGCGAGCTTGGGGCAAATGGGTGTCTGAAATCCGACAACCCAGAAAGAAAAATCGGATCTGGCTCGGAACTTTCTCCACACCGGAAATGGCCGCTCGAGCTCACGACGTCGCCGCTTTAAGCGTAAAAGGAAACTCCGCCATTCTCAACTTCCCAGAACTCGCCGAATCTCTTCCCCGCCCGGCTTCCAACTCCCCTCGAGATGTGCAGGTCGCCGCTGCGAAAGCCGCTTCAATGGAATTTCCCTCTCCTTCACTGACGTCGCCATCGCCTATCACTCAGTCTTCTTCCGCTTCTTCTTCTTCTTCGTCATCTTCCCTATCGTCTTTAGAGGAATCGACGCCGGAGGAGCTCAGTGAGATTGTACGCTTGCCGAGCTTAGGAACGAGTTACTGCTCCCTTGACTCCGGTAACGAGCTGGTATTCGTTGACTCAGTGGAAGCCTTTCTTTATCCTTACCAATGGTATCAAAGCATAAATGAAGATGAAGCTTTCTGTTTGTCAATGGCGGAAACAGAGTCAGTGATTCCTTCTGTCTGTGAAGCGTCCTTGTGCCTGCATTAA | 717 | 51.46 | MSDQPNSETESGFTNLSSPPSSSPGESTAQSPQKRSAQNINPDHPVFRGVRKRAWGKWVSEIRQPRKKNRIWLGTFSTPEMAARAHDVAALSVKGNSAILNFPELAESLPRPASNSPRDVQVAAAKAASMEFPSPSLTSPSPITQSSSASSSSSSSSLSSLEESTPEELSEIVRLPSLGTSYCSLDSGNELVFVDSVEAFLYPYQWYQSINEDEAFCLSMAETESVIPSVCEASLCLH | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 41989133 | 41989849 | - | Bda032155.1 | Bda09g01132 | 13382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01132 | 238 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Bda09g01132 | 238 | MobiDBLite | consensus disorder prediction | 132 | 163 | - | - | |
Bda09g01132 | 238 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Bda09g01132 | 238 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 6 | 225 | - | - | |
Bda09g01132 | 238 | PRINTS | Ethylene responsive element binding protein signature | 47 | 58 | IPR001471 | GO:0003700|GO:0006355 | |
Bda09g01132 | 238 | PRINTS | Ethylene responsive element binding protein signature | 69 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Bda09g01132 | 238 | SMART | rav1_2 | 46 | 109 | IPR001471 | GO:0003700|GO:0006355 | |
Bda09g01132 | 238 | Pfam | AP2 domain | 45 | 95 | IPR001471 | GO:0003700|GO:0006355 | |
Bda09g01132 | 238 | ProSiteProfiles | AP2/ERF domain profile. | 46 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Bda09g01132 | 238 | Gene3D | AP2/ERF domain | 46 | 104 | IPR036955 | GO:0003700|GO:0006355 | |
Bda09g01132 | 238 | SUPERFAMILY | DNA-binding domain | 46 | 104 | IPR016177 | GO:0003677 | |
Bda09g01132 | 238 | CDD | AP2 | 47 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Bda09g01132 | 238 | MobiDBLite | consensus disorder prediction | 131 | 163 | - | - | |
Bda09g01132 | 238 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 6 | 225 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00425 | Bda-Chr2:44879849 | Bda09g01132 | Bda-Chr9:41989133 | 2.15E-60 | dispersed | |
Bda09g01132 | Bda-Chr9:41989133 | Bda11g01093 | Bda-Chr11:10692654 | 3.64E-59 | dispersed | |
Bda11g00932 | Bda-Chr11:9113856 | Bda09g01132 | Bda-Chr9:41989133 | 2.64E-37 | dispersed | |
Bda08g00099 | Bda-Chr8:879837 | Bda09g01132 | Bda-Chr9:41989133 | 2.53E-12 | transposed | |
Bda08g00591 | Bda-Chr8:6021313 | Bda09g01132 | Bda-Chr9:41989133 | 6.86E-43 | transposed | |
Bda02g00418 | Bda-Chr2:44826486 | Bda09g01132 | Bda-Chr9:41989133 | 4.81E-98 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16422 | PF00847 | AP2 | 2.50E-13 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01132 | K09286 | - | jre:108986620 | 237.269 |