Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01136 | ATGAATAAGTTCGTCGTTTTGATCTGTTTTCATCTCTTTTCTTCTTTCTTCTGCGTTGAAGCACAGTTTGCTTCTGCAAATGAAACTCCAAAATTTCAGCCCAGTCTTGGATTGGTTATTGGCATTCTCTCCGCCATGTTCTTCCTCACCTTTGCTCTTCTCGTCTACGCTAAATTCTGTCACACCCGAGCTTCCAATCTCAACGGACTCCCCGTCCACCATGGATTTCCCAGATCGAGCTCTCGTTTTTCAGGTTTGGACAAAACGATTATCGAATCGCTGCCGTTTTTTCGATTCTCCGCTCTGAAAGGATCCAAACAAGGCCTCGAGTGCGCAGTTTGCTTGTCGAAATTTGAAGATATCGAAATTCTTCGATTGTTGCCGAAATGTAAGCACGCTTTTCACATCGATTGCATCGATCATTGGCTCGAGAAACAGGCGAACTGTCCGCTTTGCAGGCAACGGGTAAGCTCCGAAGACGTGAAAAGCTCCAATTATTCAAACAGCATGAGGTTTTTACTGACCGGTCAGTCGGAACTGAGAGAGGATTCGAATATGGAGTTTTTTGTAGAGAGAGAGGGAGACGATCGAGATCGGAAGTTGTGTTCTTCGAGATTTAGCGTCGGAAATAGCTTCCGGAAGTCGGATAAAACCGGCAACGAAAAGGAAATGCTGATCGAAAAGGTGGATGGTGAAAATGACGACGAACAACAAGTTTTGCACAAACATAATCACAAGATCATCGTGTCGGATTTCGTCTTCAAGAATCGGTGGAGCAATGTCAGCTCTTCCGACCTCATGTTCTTAAACACGGAAATGCTTTCTTCGATCTCAAGCAATAGATTCTCTTCAATGGCCGCCGATCAAACGAAAGTCCAAATCGTTGTCGAAAACGAACAAGTTTTGAAGATCAAGGAGGAGATGGAAATGAAAAGATCATTCGAGAGTAAAGTCAGCAACATCAACTCGAATCTATCGCGTTCGATCGAAAATCATCCTTCTTCATCCAGTTCGAATGAGAATTCGAGAATTATAAACCCAAAAGAGAGAAGATCGGTATCGGAAATCACGGGTCTTTCGAGATTTTCCGATTTACAGACGATCAAGAACCGGCTGGGAAATTCTTGGACGGGGGAAAGTAGTTTGAAGGAAGAGAAAACGAGGCAAATTTGGTATCCAATTGCAAGAAGAACAGTCCAGTGGTTTGCCAACAGAGAGACGAGATCTCGCCAAATCTGA | 1239 | 43.91 | MNKFVVLICFHLFSSFFCVEAQFASANETPKFQPSLGLVIGILSAMFFLTFALLVYAKFCHTRASNLNGLPVHHGFPRSSSRFSGLDKTIIESLPFFRFSALKGSKQGLECAVCLSKFEDIEILRLLPKCKHAFHIDCIDHWLEKQANCPLCRQRVSSEDVKSSNYSNSMRFLLTGQSELREDSNMEFFVEREGDDRDRKLCSSRFSVGNSFRKSDKTGNEKEMLIEKVDGENDDEQQVLHKHNHKIIVSDFVFKNRWSNVSSSDLMFLNTEMLSSISSNRFSSMAADQTKVQIVVENEQVLKIKEEMEMKRSFESKVSNINSNLSRSIENHPSSSSSNENSRIINPKERRSVSEITGLSRFSDLQTIKNRLGNSWTGESSLKEEKTRQIWYPIARRTVQWFANRETRSRQI | 412 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 42070281 | 42071519 | + | Bda032166.1 | Bda09g01136 | 13386 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01136 | 412 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 24 | 410 | - | - | |
Bda09g01136 | 412 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 24 | 410 | - | - | |
Bda09g01136 | 412 | SMART | ring_2 | 111 | 152 | IPR001841 | - | |
Bda09g01136 | 412 | CDD | RING-H2_PA-TM-RING | 110 | 153 | - | - | |
Bda09g01136 | 412 | MobiDBLite | consensus disorder prediction | 325 | 350 | - | - | |
Bda09g01136 | 412 | Pfam | Ring finger domain | 110 | 153 | IPR001841 | - | |
Bda09g01136 | 412 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 163 | IPR013083 | - | |
Bda09g01136 | 412 | ProSiteProfiles | Zinc finger RING-type profile. | 111 | 153 | IPR001841 | - | |
Bda09g01136 | 412 | SUPERFAMILY | RING/U-box | 94 | 158 | - | - | |
Bda09g01136 | 412 | MobiDBLite | consensus disorder prediction | 325 | 343 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01247 | Bda-Chr7:15321771 | Bda09g01136 | Bda-Chr9:42070281 | 4.78E-28 | dispersed | |
Bda09g01136 | Bda-Chr9:42070281 | Bda06g00018 | Bda-Chr6:187212 | 7.76E-23 | dispersed | |
Bda11g00016 | Bda-Chr11:229208 | Bda09g01136 | Bda-Chr9:42070281 | 5.87E-15 | dispersed | |
Bda13g00688 | Bda-Chr13:7785190 | Bda09g01136 | Bda-Chr9:42070281 | 1.42E-19 | dispersed | |
Bda09g01136 | Bda-Chr9:42070281 | Bda03g00470 | Bda-Chr3:4044947 | 6.72E-25 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01136 | K10664 | - | zju:107431928 | 458.373 |