Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01161 TCAGGAAAAACATTCGAAACGATCGATCCAAGAACAGAGGAGGTGATAGCGGAGATAGCAGAAGGAGACGAAAAGGACGTTGATTTGGCCGTCAAAGCTGCCCGTGAAGCCTTTGATCATGGCCCGTGGCCGCGGTTACCTGGTTTATCCAAAGAAGGCCTGAAAGCTATCAGAAAGTATTCAATGAACGGGCCATTTTCGAAGACAGCAGTAAACTTCAACGCAGGATGTCGGACAGCAATGTCGAATGTAGTAATGGCTGTCTGCATGGCACTGACTCTTCTCTTTCTAGCTCCTCTTTTCAGTTACACTCCTCTTGTCGCTCTCTCTGCAATTATCATGTCAGCCATGTTTGGCCTCATTAAATACGAAGAAGCTTTTCACCTTTTCAAGGTTGATAAGTTCGATTTCGTCATCTGCATGGCTGCTTTCTTCGGCGTTACCTTCCTGACCATGGACGTGGGTCTCATGATGTCTGTAAAAAAAATCTTTTTTGATTTTCCGAAACTTCAGGTGGGTCTTGCGATAGTTAGAGCTCTGCTGTACATGGCTAGACCTGCAACTTGCAAGCTTGGAAAGATAGAAAACTCTGCTTTGTACAGAGATGTAGAACAGTATCCTGATTCTCTGCAAATCCCAGGAATCCTTCTTCTTCAGCTTGGATCTCCAGTTTATTATGCAAACTGTAACTACTTGAGAGAGAGGGTTTTTAGATTTATCCGAGAAGAGCAGGCTATCTCGGATTCCAAAGAGGACTTGGTTGAATATGTTTTCCTAGATCTAACTGGAGTGACCGCCATTGACGTCACTGGCATTGAAGCTTTGACAGAAATACACAGAACCTTGGAATCAAAAGGAATTAAGATGGGAATAATAAACCCTAGAAGGGACGTGACGGAGAAGATGACACTTTCAAAGCTCACGGACAGAATAGGGAAAGAGTTCATCTTCCTTAGCATAGAAGATGCAGTAGAGTCATGTCGTTTTTCACTTCAAAAAATGAAGCAAAACGTGGACGACCATCAAACTGCAGATTAA 1038 43.45 SGKTFETIDPRTEEVIAEIAEGDEKDVDLAVKAAREAFDHGPWPRLPGLSKEGLKAIRKYSMNGPFSKTAVNFNAGCRTAMSNVVMAVCMALTLLFLAPLFSYTPLVALSAIIMSAMFGLIKYEEAFHLFKVDKFDFVICMAAFFGVTFLTMDVGLMMSVKKIFFDFPKLQVGLAIVRALLYMARPATCKLGKIENSALYRDVEQYPDSLQIPGILLLQLGSPVYYANCNYLRERVFRFIREEQAISDSKEDLVEYVFLDLTGVTAIDVTGIEALTEIHRTLESKGIKMGIINPRRDVTEKMTLSKLTDRIGKEFIFLSIEDAVESCRFSLQKMKQNVDDHQTAD 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42410452 42430198 + Bda032193.1 Bda09g01161 13411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01161 345 Pfam Aldehyde dehydrogenase family 3 47 IPR015590 GO:0016491
Bda09g01161 345 SUPERFAMILY SpoIIaa-like 207 327 IPR036513 -
Bda09g01161 345 Pfam STAS domain 206 323 IPR002645 -
Bda09g01161 345 PANTHER SULFATE TRANSPORTER 3.5-RELATED 60 336 IPR030316 GO:1902358
Bda09g01161 345 CDD STAS_SulP_like_sulfate_transporter 206 320 - -
Bda09g01161 345 Pfam Sulfate permease family 60 143 IPR011547 GO:0016021
Bda09g01161 345 Gene3D STAS domain 185 329 IPR036513 -
Bda09g01161 345 SUPERFAMILY ALDH-like 1 47 IPR016161 GO:0016491
Bda09g01161 345 PANTHER SULFATE TRANSPORTER 60 336 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda09g01161 345 ProSiteProfiles STAS domain profile. 205 327 IPR002645 -
Bda09g01161 345 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 56 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01161 Bda-Chr9:42410452 Bda12g00009 Bda-Chr12:68625 2.21E-93 dispersed
Bda04g00854 Bda-Chr4:58397111 Bda09g01161 Bda-Chr9:42410452 2.23E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01161 K17471 - qsu:111988838 385.571