Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01162 ATGAAGGAGAAGACCCATTTCAACCTTACCTTCACTCTCTCACTTTCCGTTGTTTTTCTTCTTGCTTCTCTGGTGTCCCTCTGTAATGGAGGCTTCATCATTTCTAGCCATGGCGGTCTCACTGACGCTGAGGCTTTGTATATCAGAAAGCGTCAGCTTCTTTACTACAGAGACGAGTTCGGCGATCGAGGAGAGAATGTAAAAGTTGATTCTTCTCTTGTTTTTCAAAACGAACGGCTCAGAAATGCTTATATTGCTTTACAAGCATGGAAGCAAGCTATTTTATCTGACCCTTTGAATCTTACCGAGAATTGGGTTGGATCTGATGTCTGTGACTATCATGGGGTTTACTGTGCTCCGGCGCCGGATAATCACAAGATCTTAACAGTCGCCGGAATCGATCTAAACCACGGCGACATTGCTGGGTACTTACCGGAAGAGCTCGGTCTACTTGTAGATCTTGCATTGTTCCACATCAACTCTAATCGGTTTTGTGGTACTGTTCCTCACAAGTTTGAACGCCTGAAACTGCTCTACGAGCTGGATCTCAGTAACAATAGGTTCGCCGGGAAGTTTCCAGTGGTGGTTCTTAAGCTTCCATCGCTTAAATTTTTGGATCTGAGGTTTAATGAGTTCGAAGGTACTATACCAAGCGACCTGTTTGATAAAGATTTGGATGCTATATTTATTAATCATAACAGGTTTAGATTTGAGCTACCGGAAAATTTCGGAAATTCTCCAGTCTCTGTTATCGTTCTTGCTAACAATAAATTTCATGGCTGTGTTCCTTCGAGCTTGGGTAATATGTCGAGGCTGAACGAGATTATTATGATGAACAATGGGTTCCGATCGTGTTTACCCCCCGAGATTGGGTTGCTGAAGAATTTGACGGTGTTTGATGTGAGTTTCAATGAGCTGCTTGGTCCGTTGCCGAAAGAAATAGGGGGCATGGTCAGTTTGGAGCAGCTTAATGTGGCTCATAATCTTCTCTCCGGGAACATTCCGGCCAGTATTTGTAAACTTCCCAATCTGCAGAATTTCACTTTCTCATATAACTTCTTTACCGGTGAGCCGCCGGCGTGCTTGGGGCTTTCAGATTTCGACGACCGAAGAAACTGCTTGCCTGAGCGGCCGCTCCAGAGGTCTGGCAACCAATGTAAGTCGTTTTTGTCCAAGCCGGTTGACTGTGGCTCGTTTAGATGTAAACCTTTTGTTCCTACTTTACCGCCGCCACCTCCTCCGTCTCCCCCTGTCTTCCCTCCGCCGCCGGTTACTATTCTCTCTCCCCCACCTTCACCTATTTACCCTCCACAATCGCTCCCACCACCGTCTCCACCTTCATCATCACCCCCACCGCCTCCCGTTCATTCTCCTCCCCCACCACCTTCTCCGCCTCCACCAATTTACTTTTCCCCTCCGCCACCATCTCCATCGCCTCCAGTTTACTCTCCTCCTCCGCCTCCACCACCTCCACCACCTCTACCACCTCCACCACCTCCACCTCCGCCTCCACCTATTTACTCTCCTCCTCCACCTCCACCTCCGCCTCCACCAATTTACTTTTCCCCTCCGCCACCTTCTCCACCGCCTCCAGTTTACTCTCCTCCTCCGCCTTCACCACCTTCACCACCTCCACCACCTCCACCACCTCCACCACCTCCACCACCTCCACCACCTCCACCACCTCCACCACCTCCACCTATTTACTCTCCACCACCACCTCCAATTCAATACTTGCCGCCTCCATCACCATTCCCCCCGCCTCCACCTCCACCCCACATAGTTCATCACTCTCCTCCTCCTCCGATTGGCTGTGAAACTCCGGCTTCTCCACCACCATCACCAATCCCTGTGCATGAAAATCCTCCTCCTGCTACCCCCTCATATGAAGGGCCATTACCGCCCATACACGGAGTTTCATACGCATCTCCTCCGCCCCCACCCTTCTATTGA 1953 49.97 MKEKTHFNLTFTLSLSVVFLLASLVSLCNGGFIISSHGGLTDAEALYIRKRQLLYYRDEFGDRGENVKVDSSLVFQNERLRNAYIALQAWKQAILSDPLNLTENWVGSDVCDYHGVYCAPAPDNHKILTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFERLKLLYELDLSNNRFAGKFPVVVLKLPSLKFLDLRFNEFEGTIPSDLFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLANNKFHGCVPSSLGNMSRLNEIIMMNNGFRSCLPPEIGLLKNLTVFDVSFNELLGPLPKEIGGMVSLEQLNVAHNLLSGNIPASICKLPNLQNFTFSYNFFTGEPPACLGLSDFDDRRNCLPERPLQRSGNQCKSFLSKPVDCGSFRCKPFVPTLPPPPPPSPPVFPPPPVTILSPPPSPIYPPQSLPPPSPPSSSPPPPPVHSPPPPPSPPPPIYFSPPPPSPSPPVYSPPPPPPPPPPLPPPPPPPPPPPIYSPPPPPPPPPPIYFSPPPPSPPPPVYSPPPPSPPSPPPPPPPPPPPPPPPPPPPPPPPPPIYSPPPPPIQYLPPPSPFPPPPPPPHIVHHSPPPPIGCETPASPPPSPIPVHENPPPATPSYEGPLPPIHGVSYASPPPPPFY 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42437508 42439460 + Bda032194.1 Bda09g01162 13412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01162 650 MobiDBLite consensus disorder prediction 429 500 - -
Bda09g01162 650 PRINTS Proline rich extensin signature 409 425 - -
Bda09g01162 650 PRINTS Proline rich extensin signature 430 442 - -
Bda09g01162 650 PRINTS Proline rich extensin signature 446 467 - -
Bda09g01162 650 SUPERFAMILY L domain-like 84 363 - -
Bda09g01162 650 MobiDBLite consensus disorder prediction 528 650 - -
Bda09g01162 650 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 25 479 - -
Bda09g01162 650 Gene3D Ribonuclease Inhibitor 246 374 IPR032675 -
Bda09g01162 650 Gene3D Ribonuclease Inhibitor 83 245 IPR032675 -
Bda09g01162 650 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 25 479 - -
Bda09g01162 650 MobiDBLite consensus disorder prediction 528 631 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01120 Bda-Chr9:41803808 Bda09g01162 Bda-Chr9:42437508 1.08E-96 dispersed
Bda09g01162 Bda-Chr9:42437508 Bda11g00593 Bda-Chr11:6051484 2.01E-147 dispersed
Bda09g01162 Bda-Chr9:42437508 Bda09g00445 Bda-Chr9:5862398 1.69E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01162 - - pvy:116114776 667.151