Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01174 ATGGAGGGTCTTCTGAGTAAAGGGGTTTTTTGTGGGCAAGAACAATTAGAGCAACTTTCGAGAGACGACAGCCATTACAGTTTGACTACTGGTGTTTTGCCGCCGCTTGGAGCCAGAACCAACCGGAGAACCAAGCTCCGGCGGTTTGTTATTTCGCCGTACGACCGCAGATACAGGTTGTGGGAGACATTTCTCATTGTTCTTGTGGTCTATACGGCTTGGGCATCGCCTTTTGAATTAGGATTTCTGAGAAAACCAGAGGGTCCACTCGCGATTATTGATAATGTTGTTAATGGTTTTTTTGCCATTGACATTGTTCTCACATTCTTTGTTGCTTACTTGGAAAAAACCACCTATCTGCTTGTTGATGAACCAAAGAAGATTGCTTGGAAATATACAAGTTCTTGGTTAACCTTTGATGTCATTTCGACTACTCCTTCCGAAGTTGTCGCGAAGATCTTCCCTTCCCCATTTCAATCTTATGGCTTCTTCAACATGCTTCGCCTTTGGCGTCTCCGTCGAGTTAGCAAGCTTTTCTCGAGATTGGAGAAGGATAGACATTATAACTACTTCTGGGTCAGATGTGCAAAGCTTGTTTGTGTTACCCTTTTCGCTGTTCATACCGCAGGATGCTTCTACTATCTACTTGCAGCCAGGTATCCTGTCCCGAAAAGGACATGGATTGGCCAATCAAATGAGAATTTCCGTGAAGAAAGCTTGTGGATCAGATATGTCACTTCCATTTATTGGTCTATCACTACTCTTACAACTGTTGGATATGGTGATTTGCATGCAGTGAATATAAGGGAAATGATTTTCGACATATTCTATATGCTTTTCAATCTTGGTTTGACTGCATACTTGATCGGAAATATGACCAACTTGGTTGTTCATGGGACCAGTCGAACTCGGAGATTCGTAAGTAAAATTATTAAGATTTTTTCTTGTTTTTTGTCGCATTGTTTGAAATTTATGTTTTTGTCTGGTTTGCAGAGAGACACTATACAAGCTGCTTCTAGTTTTGCTCAGAGGAATCAACTTCCTCCACGCTTGCAGGATCAAATGCTTGCACATTTGTGTTTGAAGTTTAGAACAGATTCAGAAGGACTTCAACAGCAGGAAACTCTTGATTCTCTCCCGAAAGCCATCCGGTCTAGCATTTCGCATTATCTGTTCTACTCTCTCGTCGATAAAGTCTACTTATTTCGTGGCGTCTCAAACGACTTGCTCTTCCAACTGGTCTCGGAGATGAAAGCCGAGTATTTTCCTCCGAAAGAAGATGTCATCTTGCAAAACGAAGCCCCTACCGACTTCTATATTCTTGCCACCGGAGCTGATCTACTTGTTCTAAAAAATGGAGTGGAACACGTTGTGAGGGAGGCGAAGTCGGGCGATCTCTGTGGTGAAATAGGAGTTCTTTGTTATCGACCTCAGTTATTCACAGTTCGAACAAAGCGATTGAGCCAACTTTTGCGATTAAATCGTACAACTTTCTTGAACATCGTACAAGCAAACGTCGGTGATGGAACGATCATAATGAACAATCTCCTTCAGCATTTGAAGGAACACAAGGACCCAATAATGGAGGGCATTTTGCTGGAGACAGAGAACATGTTAGCTCGAGGACGAATGGACCTACCTCTCAGTCTTTGCTTTGCAGCCATGAGAGGAGATGATTTGCTCTTGCACCAGCTTCTGAAAAGAGGGTTGGATCCTAATGAATCTGACAATAATGGCAGATCAGCTCTGCACATTGCAGCATCCAAAGGAAGTGAAAACTGTGTTCTTCTGCTGCTTGATTATGGTGCAGATCCAAACTGTAGAGATTCTAGTCCAATGCTTAGAAATGGAGATACTGGTGATTGGATTGGGACGTTTGAAGGCCATAAAGGTGCAGTGTGGAGTTGTTGCTTGGACTCTAATGCATTACGTGCTGCTACTGGTTCTGCTGATTTTTCTGCGAAACTATGGGATGCAATAACGGGAGATGAGCTACACTCATTTGCACACAAGCACATTGTTCGTGCATGTGCATTTTCAGAGGATACATACTTTTTATTGACCGGTGGCATCGAAAAGGTTCTCCGTATCTATGATTTGAACCGTCCAGAGGCACCTCCGAGAGAAGTGGATAGGTCCCCAGGTTCAATCAGAGCAGTTTCATGGCTTCATAGTGATCAAACTATTTTAAGTTCTTGCACAGACATGGGCGGTGTCAGGCTATGGGATGTACGGAGTGGTAAAATAGTCCAAACGCTGGATACTAAGTCGTCGGTGACCAGTGCAGAAGTTAGTCAGGATGGTCGGTACATCACTACCACTGATGGGTCAACTGTTAAATTCTGGGACGCAAATCACTTTGGATTAGTGAAGAGTTACAGCATGCCTTGCACTATGGAATCAGCTTCACTTGAACCAAAATTTGGTAACAAGTTCATAGCAGGTGGAGAAGATATGTGGATCCATATGTTTGATTTTCATACTGGGTTTGAAATTGCATGTAACAAGGGTCATCACGGGCCAGTGCATTGCCTGCGCTTTTCGCCAAGCGGAGAAACCTATGCCTCTGGATCCGAGGATGGAACGGTTAGAATATGGCAGGCCGGTCCTTCGTCAAGCGATGAATCTGAAGCAATTGCGACAAATGGGTCCGTCAGGAAAGTGACTGTAAGCGTCGAAGAAGTTGCACGAAAGATCGAAGGGTTTAACATTGCCCACGAGGGAAAGTCCAAAGAGAAAGATGAGTATGGGAATGAGTGA 2760 43.73 MEGLLSKGVFCGQEQLEQLSRDDSHYSLTTGVLPPLGARTNRRTKLRRFVISPYDRRYRLWETFLIVLVVYTAWASPFELGFLRKPEGPLAIIDNVVNGFFAIDIVLTFFVAYLEKTTYLLVDEPKKIAWKYTSSWLTFDVISTTPSEVVAKIFPSPFQSYGFFNMLRLWRLRRVSKLFSRLEKDRHYNYFWVRCAKLVCVTLFAVHTAGCFYYLLAARYPVPKRTWIGQSNENFREESLWIRYVTSIYWSITTLTTVGYGDLHAVNIREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRRFVSKIIKIFSCFLSHCLKFMFLSGLQRDTIQAASSFAQRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILATGADLLVLKNGVEHVVREAKSGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKEHKDPIMEGILLETENMLARGRMDLPLSLCFAAMRGDDLLLHQLLKRGLDPNESDNNGRSALHIAASKGSENCVLLLLDYGADPNCRDSSPMLRNGDTGDWIGTFEGHKGAVWSCCLDSNALRAATGSADFSAKLWDAITGDELHSFAHKHIVRACAFSEDTYFLLTGGIEKVLRIYDLNRPEAPPREVDRSPGSIRAVSWLHSDQTILSSCTDMGGVRLWDVRSGKIVQTLDTKSSVTSAEVSQDGRYITTTDGSTVKFWDANHFGLVKSYSMPCTMESASLEPKFGNKFIAGGEDMWIHMFDFHTGFEIACNKGHHGPVHCLRFSPSGETYASGSEDGTVRIWQAGPSSSDESEAIATNGSVRKVTVSVEEVARKIEGFNIAHEGKSKEKDEYGNE 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42587681 42598936 - Bda032211.1 Bda09g01174 13424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01174 919 CDD WD40 623 867 - -
Bda09g01174 919 SMART cnmp_10 401 517 IPR000595 -
Bda09g01174 919 ProSiteProfiles cAMP/cGMP binding motif profile. 401 502 IPR000595 -
Bda09g01174 919 PANTHER POTASSIUM CHANNEL AKT1 12 316 IPR045319 GO:0005249|GO:0006813
Bda09g01174 919 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515
Bda09g01174 919 Gene3D Jelly Rolls 365 525 IPR014710 -
Bda09g01174 919 ProSiteProfiles Trp-Asp (WD) repeats profile. 667 708 IPR001680 GO:0005515
Bda09g01174 919 SMART WD40_4 619 658 IPR001680 GO:0005515
Bda09g01174 919 SMART WD40_4 661 699 IPR001680 GO:0005515
Bda09g01174 919 SMART WD40_4 703 743 IPR001680 GO:0005515
Bda09g01174 919 SMART WD40_4 746 783 IPR001680 GO:0005515
Bda09g01174 919 SMART WD40_4 828 867 IPR001680 GO:0005515
Bda09g01174 919 SUPERFAMILY Voltage-gated potassium channels 53 296 - -
Bda09g01174 919 PANTHER K+ TRANSPORTER 1-RELATED 332 611 - -
Bda09g01174 919 PANTHER K+ TRANSPORTER 1-RELATED 12 316 - -
Bda09g01174 919 ProSiteProfiles Ankyrin repeat region circular profile. 578 609 - -
Bda09g01174 919 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 835 867 - -
Bda09g01174 919 SUPERFAMILY WD40 repeat-like 607 870 IPR036322 GO:0005515
Bda09g01174 919 SUPERFAMILY Ankyrin repeat 550 610 IPR036770 -
Bda09g01174 919 SMART ANK_2a 545 574 IPR002110 GO:0005515
Bda09g01174 919 SMART ANK_2a 578 607 IPR002110 GO:0005515
Bda09g01174 919 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 626 658 - -
Bda09g01174 919 Gene3D - 59 297 - -
Bda09g01174 919 ProSiteProfiles Trp-Asp (WD) repeats profile. 626 667 IPR001680 GO:0005515
Bda09g01174 919 Gene3D - 611 887 IPR015943 GO:0005515
Bda09g01174 919 Pfam Ankyrin repeats (3 copies) 550 609 IPR002110 GO:0005515
Bda09g01174 919 Pfam WD domain, G-beta repeat 623 658 IPR001680 GO:0005515
Bda09g01174 919 Pfam WD domain, G-beta repeat 836 866 IPR001680 GO:0005515
Bda09g01174 919 Pfam WD domain, G-beta repeat 748 783 IPR001680 GO:0005515
Bda09g01174 919 Pfam WD domain, G-beta repeat 663 699 IPR001680 GO:0005515
Bda09g01174 919 PRINTS EAG/ELK/ERG potassium channel family signature 105 114 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda09g01174 919 PRINTS EAG/ELK/ERG potassium channel family signature 244 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda09g01174 919 PRINTS EAG/ELK/ERG potassium channel family signature 288 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda09g01174 919 PRINTS EAG/ELK/ERG potassium channel family signature 94 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda09g01174 919 PRINTS EAG/ELK/ERG potassium channel family signature 270 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda09g01174 919 PRINTS EAG/ELK/ERG potassium channel family signature 71 78 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda09g01174 919 CDD CAP_ED 401 505 IPR000595 -
Bda09g01174 919 Pfam Ion transport protein 59 303 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bda09g01174 919 Pfam Cyclic nucleotide-binding domain 421 504 IPR000595 -
Bda09g01174 919 ProSiteProfiles Trp-Asp (WD) repeats profile. 835 867 IPR001680 GO:0005515
Bda09g01174 919 PANTHER POTASSIUM CHANNEL AKT1 332 611 IPR045319 GO:0005249|GO:0006813
Bda09g01174 919 SUPERFAMILY cAMP-binding domain-like 332 520 IPR018490 -
Bda09g01174 919 Gene3D - 532 610 IPR036770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00717 Bda-Chr1:34445562 Bda09g01174 Bda-Chr9:42587681 4.26E-175 dispersed
Bda01g01868 Bda-Chr1:54769393 Bda09g01174 Bda-Chr9:42587681 3.14E-169 dispersed
Bda01g01872 Bda-Chr1:54817170 Bda09g01174 Bda-Chr9:42587681 9.91E-170 dispersed
Bda03g00048 Bda-Chr3:613252 Bda09g01174 Bda-Chr9:42587681 0 dispersed
Bda01g00797 Bda-Chr1:37552391 Bda09g01174 Bda-Chr9:42587681 0 transposed
Bda01g01133 Bda-Chr1:46235114 Bda09g01174 Bda-Chr9:42587681 3.41E-103 transposed
Bda07g00893 Bda-Chr7:10448102 Bda09g01174 Bda-Chr9:42587681 8.66E-34 transposed
Bda02g00458 Bda-Chr2:45340521 Bda09g01174 Bda-Chr9:42587681 4.80E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01174 K21867 - zju:107432387 1031.17