Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01253 ATGGAAGAAGACGCCAATTCTTGGTTAAGGAGAACGAAATTTTCTCACACAGTTTGTCATCGATTGGATTCGTTGAAATATACTTCAGTTCCTATCACTTTTGAGCCCAATTGGAATTCGGAGTTTAGATCAAGACCTCAAATTCCAACCTCCGATCACAATTTGGCTACCTGTAGTTCTCAAATTTATCGGAAACCGAAGCACAGGTCTTTGTCTCCTCTTCCCAAGAACATACTCTCCCACGAATTTAAGGAAGCGCAGTCTGATCGGAAGCGGTTTTCATCTCCATGTCCTCGCCGAAGAGAACCTGAGACGCTGAAAATTGAAAAGACCAAATCATTCGAATTGAGGTTTCTTTCGAGTACGAACCTTTTGAAGCATTTTGTTTCAAATAAAGGGCAGGAAAAGTCCAAACCGAAAAAGGAATCTGGGTGGACTAAGTATTTTGATTATGGTGGAGGTAGGGTAACTGCTGTGGAAGCAGCTGACGAGTGTAGTGTTGATCTGTCCAAGCTGTTTCTCGGTCTAAGGTTCGCCCATGGAGCTCACAGCCGTCTCTACCATGGAGTCTACAACGATGAAGCAGTTGCTGTAAAGATTATCAGAGTTCCAGATGATGATGAAAATGGAGTTCTAGGAGCTCGGCTGGAGAAGCAATATAGCAGAGAAGTCTCTCTACTCTCTCGTCTCCACCATCCAAATGTGATAAAGTTTACAGCAGCCTGTAGAGAGCCGCCGGTCTATTGTATCATCACGGAATATCTTCAAGAGGGATCACTAAGGGCGTATTTGCACAAACAAGAGAGAAAACCTCTTCCTTTACAAAAACTTATCAAATTTGCATTGGATATTTCTCGAGGGATGGAGTTCATTCACTCCAAAGGTGTCATTCATCGGGATCTCAAGCCCGAGAATGTTCTCATTGATCAAGAATTCCACCTAAAAGTTGCCGATTTTGGTATAGCTTGTGAAGAGGCGTATTGTGATGCTCTGGCTGATGATCCGGGGACTTACCGGTGGATGGCTTCCGAGATGATCAAACACAAATCTTACGGCCGGAAAGTTGATGTCTACAGTTTTGGTCTCATCTTGTGGGAAATGGTCGCCGGAGCTATTCCCTACGAGGATATGACCCCAATCCAAGTTGCCTTTGCCGTAGTGAATAAGAATCTTAGACCGGTAATTCCGGACAGCTGCCCACACCCAATGAGAGCGCTGATCGAACACTGTTGGTCGGTGGAGCCGGAAAAGAGGCCAGAGTTTTGGCAAGTGGTTAAGGTTTTGGAGCAATTCGAAAGGTCTCTCGCGCAGGACGGGACGTTGAATCTGGTGCAGGACCCGAGTCCAAGTTGCCATGATCACAAGAAAAGGCTTCTCCAATGGATTCAAAAGCTGGGAGCATTCAAACACTCGGCACAAGCCTAA 1425 45.4 MEEDANSWLRRTKFSHTVCHRLDSLKYTSVPITFEPNWNSEFRSRPQIPTSDHNLATCSSQIYRKPKHRSLSPLPKNILSHEFKEAQSDRKRFSSPCPRRREPETLKIEKTKSFELRFLSSTNLLKHFVSNKGQEKSKPKKESGWTKYFDYGGGRVTAVEAADECSVDLSKLFLGLRFAHGAHSRLYHGVYNDEAVAVKIIRVPDDDENGVLGARLEKQYSREVSLLSRLHHPNVIKFTAACREPPVYCIITEYLQEGSLRAYLHKQERKPLPLQKLIKFALDISRGMEFIHSKGVIHRDLKPENVLIDQEFHLKVADFGIACEEAYCDALADDPGTYRWMASEMIKHKSYGRKVDVYSFGLILWEMVAGAIPYEDMTPIQVAFAVVNKNLRPVIPDSCPHPMRALIEHCWSVEPEKRPEFWQVVKVLEQFERSLAQDGTLNLVQDPSPSCHDHKKRLLQWIQKLGAFKHSAQA 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43954460 43956074 + Bda032318.2 Bda09g01253 13503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01253 474 ProSiteProfiles Protein kinase domain profile. 172 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01253 474 SMART serkin_6 172 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01253 474 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 453 - -
Bda09g01253 474 Gene3D Phosphorylase Kinase; domain 1 161 256 - -
Bda09g01253 474 Pfam Protein tyrosine and serine/threonine kinase 178 428 IPR001245 GO:0004672|GO:0006468
Bda09g01253 474 CDD STKc_MAP3K-like 179 428 - -
Bda09g01253 474 PRINTS Tyrosine kinase catalytic domain signature 252 265 IPR001245 GO:0004672|GO:0006468
Bda09g01253 474 PRINTS Tyrosine kinase catalytic domain signature 290 308 IPR001245 GO:0004672|GO:0006468
Bda09g01253 474 PRINTS Tyrosine kinase catalytic domain signature 355 377 IPR001245 GO:0004672|GO:0006468
Bda09g01253 474 PRINTS Tyrosine kinase catalytic domain signature 399 421 IPR001245 GO:0004672|GO:0006468
Bda09g01253 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Bda09g01253 474 Gene3D Transferase(Phosphotransferase) domain 1 257 465 - -
Bda09g01253 474 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 453 - -
Bda09g01253 474 SUPERFAMILY Protein kinase-like (PK-like) 164 428 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00991 Bda-Chr7:11731010 Bda09g01253 Bda-Chr9:43954460 3.09E-166 dispersed
Bda09g01253 Bda-Chr9:43954460 Bda14g00817 Bda-Chr14:6283031 6.22E-105 dispersed
Bda09g01253 Bda-Chr9:43954460 Bda01g01720 Bda-Chr1:53277260 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69819 PF07714 PK_Tyr_Ser-Thr 9.00E-61 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01253 - - jre:109014417 681.019